RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 HEATR6Q6AI08 1181 aaKnown RBP14.04□□□□□ -0.16
SCAF11-208ENST00000546534 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 CPLX2Q6PUV4 134 aaKnown RBP14.04□□□□□ -0.16
SCAF11-208ENST00000546534 RUFY3Q7L099 469 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 TCEAL8Q8IYN2 117 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 BSNDQ8WZ55 320 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 DDX1Q92499 740 aaKnown RBP14.04□□□□□ -0.16
SCAF11-208ENST00000546534 ADPGKQ9BRR6 497 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 RBM12Q9NTZ6 932 aaKnown RBP14.04□□□□□ -0.16
SCAF11-208ENST00000546534 NCANO14594 1321 aa14.04□□□□□ -0.16
SCAF11-208ENST00000546534 K7ESF4 209 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 DPYSL4O14531 572 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 ZNF263O14978 683 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 FOXD2O60548 495 aaPredicted RBP14.03□□□□□ -0.16
SCAF11-208ENST00000546534 DTNBO60941 627 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 MOSPD3O75425 235 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 PRKCBP05771 671 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCAF11-208ENST00000546534 ATF2P15336 505 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 PTGDRQ13258 359 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 MAPK6Q16659 721 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 CYP4A22Q5TCH4 519 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 PDZD4Q76G19 769 aaPredicted RBP14.03□□□□□ -0.16
SCAF11-208ENST00000546534 LONP2Q86WA8 852 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 FAM160A2Q8N612 972 aaPredicted RBP14.03□□□□□ -0.16
SCAF11-208ENST00000546534 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 UROC1Q96N76 676 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 CCDC113Q9H0I3 377 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 INSL5Q9Y5Q6 135 aa14.03□□□□□ -0.16
SCAF11-208ENST00000546534 ARNTLO00327 626 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 ACKR2O00590 384 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 TM4SF5O14894 197 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 PAPSS2O95340 614 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-208ENST00000546534 GJA1P17302 382 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 ATP2B1P20020 1258 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 HOXC13P31276 330 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 SHC2P98077 582 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 SOX4Q06945 474 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-208ENST00000546534 SF3A2Q15428 464 aaKnown RBP14.02□□□□□ -0.17
SCAF11-208ENST00000546534 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-208ENST00000546534 WDR44Q5JSH3 913 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 Q6ZS52 159 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 CEP68Q76N32 757 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 MFSD6LQ8IWD5 586 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 MCPH1Q8NEM0 835 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 ZSCAN18Q8TBC5 510 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-208ENST00000546534 C2orf40Q9H1Z8 148 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 TTC12Q9H892 705 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-208ENST00000546534 TRPV4Q9HBA0 871 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 C2orf42Q9NWW7 574 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 CEP72Q9P209 647 aa14.02□□□□□ -0.17
SCAF11-208ENST00000546534 SMIM28A0A1B0GU29 152 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 SPATA31C1P0DKV0 1188 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 MYL4P12829 197 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 XBP1P17861 261 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 TXKP42681 527 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 SOX9P48436 509 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 NR5A1Q13285 461 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 LRRC32Q14392 662 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 CALCRLQ16602 461 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 DCAF4L1Q3SXM0 396 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 ZNF512Q96ME7 567 aaPredicted RBP14.01□□□□□ -0.17
SCAF11-208ENST00000546534 TICRRQ7Z2Z1 1910 aa14.01□□□□□ -0.17
SCAF11-208ENST00000546534 CNOT1A5YKK6 2376 aaKnown RBP14.01□□□□□ -0.17
SCAF11-208ENST00000546534 SLC38A8A6NNN8 435 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 HEPACAM2A8MVW5 462 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 H7C4K7 107 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 SNPHO15079 494 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 AXIN1O15169 862 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 HOXB3P14651 431 aaPredicted RBP14□□□□□ -0.17
SCAF11-208ENST00000546534 KPNA1P52294 538 aaPredicted RBP14□□□□□ -0.17
SCAF11-208ENST00000546534 LIMK1P53667 647 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 MLLT6P55198 1093 aaPredicted RBP14□□□□□ -0.17
SCAF11-208ENST00000546534 MRPL58Q14197 206 aaKnown RBP14□□□□□ -0.17
SCAF11-208ENST00000546534 CCDC6Q16204 474 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 TPGS2Q68CL5 300 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 IQCEQ6IPM2 695 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 ELMOD1Q8N336 334 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 DEPTORQ8TB45 409 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 CSGALNACT1Q8TDX6 532 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 TNFRSF25Q93038 417 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 RSPRY1Q96DX4 576 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 ARRDC1-AS1Q9H2J1 176 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 C8orf33Q9H7E9 229 aaPredicted RBP14□□□□□ -0.17
SCAF11-208ENST00000546534 RXFP3Q9NSD7 469 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 FBXL5Q9UKA1 691 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 CYP46A1Q9Y6A2 500 aa14□□□□□ -0.17
SCAF11-208ENST00000546534 PODXLO00592 558 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 WNT7AO00755 349 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 SYN3O14994 580 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 CDKL5O76039 1030 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 HOXA6P31267 233 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 NAMPTP43490 491 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 EPHA5P54756 1037 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 SCRN1Q12765 414 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 TWF1Q12792 350 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 TEAD2Q15562 447 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 CTXN3Q4LDR2 81 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms