RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 DSTYKQ6XUX3 929 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 WDR49Q8IV35 697 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 CSGALNACT2Q8N6G5 542 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 POP1Q99575 1024 aaKnown RBP18.18■□□□□ 0.5
LTBR-215ENST00000546296 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 MTMR12Q9C0I1 747 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 INTS13Q9NVM9 706 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 CLDND1Q9NY35 253 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 IRAK3Q9Y616 596 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 CITO14578 2027 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 ANO9A1A5B4 782 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 FSD2A1L4K1 749 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 PPP1R3GB7ZBB8 358 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 PIRO00625 290 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 PPEF2O14830 753 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 ITGB3P05106 788 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 KRT13P13646 458 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 PAX3P23760 479 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 CCNE1P24864 410 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 PSMC2P35998 433 aaKnown RBP18.17■□□□□ 0.5
LTBR-215ENST00000546296 RBP5P82980 135 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 CREMQ03060 361 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 LRRC63Q05C16 580 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 LLGL2Q6P1M3 1020 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 PDXDC1Q6P996 788 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 FAM186BQ8IYM0 893 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 EFHBQ8N7U6 833 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 OR5B17Q8NGF7 314 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 NELFBQ8WX92 580 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 HLA-CQ95604 372 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 SUSD3Q96L08 255 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.17■□□□□ 0.5
LTBR-215ENST00000546296 ITGA11Q9UKX5 1188 aa18.17■□□□□ 0.5
LTBR-215ENST00000546296 LILRB3O75022 631 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 CLASP2O75122 1294 aaKnown RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 AKAP3O75969 853 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 SLC34A2O95436 690 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 CNPP09543 421 aaKnown RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 FGFR3P22607 806 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 TKTP29401 623 aaKnown RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 POLR2BP30876 1174 aaKnown RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 LILRA4P59901 499 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 PRSS55Q6UWB4 352 aaPredicted RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 USP37Q86T82 979 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 GPR65Q8IYL9 337 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 C1orf127Q8N9H9 656 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 APPL2Q8NEU8 664 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 PABPC5Q96DU9 382 aaKnown RBP18.16■□□□□ 0.5
LTBR-215ENST00000546296 EEF2KMTQ96G04 330 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 ZNF560Q96MR9 790 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 KLHL5Q96PQ7 755 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 PRDM6Q9NQX0 595 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 PCDHB8Q9UN66 801 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 COG5Q9UP83 839 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 CTNND2Q9UQB3 1225 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 PTPRJQ12913 1337 aa18.16■□□□□ 0.5
LTBR-215ENST00000546296 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 BICDL2A1A5D9 508 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 TRIM49BA6NDI0 452 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 SYN3O14994 580 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 MAPK13O15264 365 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 LINC01565O15544 149 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 PHACTR2O75167 634 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 ADH1AP07327 375 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 SRGAP2BP0DMP2 458 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 EPB41P11171 864 aaKnown RBP18.15■□□□□ 0.5
LTBR-215ENST00000546296 PNPLA4P41247 253 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 NDUFV1P49821 464 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 TAF6P49848 677 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 PMS1P54277 932 aaKnown RBP18.15■□□□□ 0.5
LTBR-215ENST00000546296 ADAM15Q13444 863 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 PSMD5Q16401 504 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 SV2CQ496J9 727 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 INTS8Q75QN2 995 aaKnown RBP18.15■□□□□ 0.5
LTBR-215ENST00000546296 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 PPFIBP1Q86W92 1011 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 MLKLQ8NB16 471 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 LNX1Q8TBB1 728 aaPredicted RBP18.15■□□□□ 0.5
LTBR-215ENST00000546296 PARD3BQ8TEW8 1205 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 PIK3R5Q8WYR1 880 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 RXFP1Q9HBX9 757 aa18.15■□□□□ 0.5
LTBR-215ENST00000546296 ARHGEF37A1IGU5 675 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 H7C4K7 107 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 TEX28O15482 410 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 RPL17P18621 184 aaKnown RBP18.14■□□□□ 0.49
LTBR-215ENST00000546296 VAMP7P51809 220 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 AP3M2P53677 418 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 STX17P56962 302 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 BFSP1Q12934 665 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 PAK1Q13153 545 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 TRPC3Q13507 836 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 VARS2Q5ST30 1063 aaKnown RBP18.14■□□□□ 0.49
LTBR-215ENST00000546296 ANKS3Q6ZW76 656 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 GLYCTKQ8IVS8 523 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 TMC2Q8TDI7 906 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 SENP8Q96LD8 212 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms