RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 AGR3Q8TD06 166 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 NSUN4Q96CB9 384 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 CMTM5Q96DZ9 223 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 HIST1H2AHQ96KK5 128 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 HIST1H2AJQ99878 128 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 H2AFJQ9BTM1 129 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 LIMA1Q9UHB6 759 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 C5orf58C9J3I9 102 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 ZNF200P98182 395 aaPredicted RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 DMC1Q14565 340 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 SPATA21Q7Z572 469 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 CALML6Q8TD86 181 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 MYH11P35749 1972 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 TKFCQ3LXA3 575 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 RGL1Q9NZL6 768 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 SNAP23O00161 211 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 SMAPO00193 183 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 ALDH18A1P54886 795 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 CATSPERBQ9H7T0 1116 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 ARHGEF38Q9NXL2 777 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 AASDHQ4L235 1098 aaPredicted RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 ARL8AQ96BM9 186 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 RBM15Q96T37 977 aaKnown RBP eCLIP12.28□□□□□ -0.44
CIT-217ENST00000545913 ANKRD12Q6UB98 2062 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 FAM47DPA6NHR8 397 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 MAFGO15525 162 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 SRGNP10124 158 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 MYL2P10916 166 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 NLRP11P59045 1033 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 SPATA18Q8TC71 538 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 OTULINQ96BN8 352 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 NPHS2Q9NP85 383 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 OLFML3Q9NRN5 406 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.44
CIT-217ENST00000545913 SYNDIG1LA6NDD5 238 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 ST8SIA6P61647 398 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 CCDC85BQ15834 202 aaPredicted RBP12.27□□□□□ -0.44
CIT-217ENST00000545913 LRIG3Q6UXM1 1119 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 ZNF677Q86XU0 584 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 TRPC7Q9HCX4 862 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 AKR1B1P15121 316 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 RFC5P40937 340 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 SESN2P58004 480 aaPredicted RBP12.27□□□□□ -0.44
CIT-217ENST00000545913 CCDC144BQ3MJ40 725 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 ANKMY2Q8IV38 441 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 REEP2Q9BRK0 252 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 POLD4Q9HCU8 107 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 MTSS1O43312 755 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 HMGCS2P54868 508 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 SLC30A5Q8TAD4 765 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 MS4A14Q96JA4 679 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 NEU2Q9Y3R4 380 aa12.27□□□□□ -0.44
CIT-217ENST00000545913 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.44
CIT-217ENST00000545913 SPDYE5A6NIY4 337 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 UCHL3P15374 230 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 DPYDQ12882 1025 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 SPDYE7PQ495Y7 208 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 SV2CQ496J9 727 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 CPA5Q8WXQ8 436 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 NT5C1AQ9BXI3 368 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 ENO1P06733 434 aaKnown RBP12.27□□□□□ -0.45
CIT-217ENST00000545913 RGS4P49798 205 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 PPP1R36Q96LQ0 422 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 PHF20Q9BVI0 1012 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 RNF181Q9P0P0 153 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 RHOBTB3O94955 611 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 PCSK1P29120 753 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 NMT1P30419 496 aaKnown RBP12.27□□□□□ -0.45
CIT-217ENST00000545913 EXOSC10Q01780 885 aaKnown RBP12.27□□□□□ -0.45
CIT-217ENST00000545913 KDSRQ06136 332 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 ICE2Q659A1 982 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 SGSM3Q96HU1 749 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 NPHP3-ACAD11A0A0J9YXS1 232 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 RASSF10A6NK89 507 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 POLBP06746 335 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 ACOT2P49753 483 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 GUCY1A3Q02108 690 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 TTC39BQ5VTQ0 682 aaPredicted RBP12.27□□□□□ -0.45
CIT-217ENST00000545913 DDX53Q86TM3 631 aaKnown RBP12.27□□□□□ -0.45
CIT-217ENST00000545913 PHF21AQ96BD5 680 aa12.27□□□□□ -0.45
CIT-217ENST00000545913 ZNF668Q96K58 619 aaPredicted RBP12.27□□□□□ -0.45
CIT-217ENST00000545913 MUC3BQ9H195 1237 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms