RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 RNF214Q8ND24 703 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 BEST2Q8NFU1 509 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 FAM200AQ8TCP9 573 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 TMEM175Q9BSA9 504 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 NAT10Q9H0A0 1025 aaKnown RBP17.59■□□□□ 0.41
LIMS2-217ENST00000545738 RFXAPO00287 272 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 LAG3P18627 525 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 DNAJB1P25685 340 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 BRCC3P46736 316 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.41
LIMS2-217ENST00000545738 TAS1R2Q8TE23 839 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 SEMA4DQ92854 862 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 IGSF21Q96ID5 467 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 ZNF558Q96NG5 402 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 TGS1Q96RS0 853 aaKnown RBP17.58■□□□□ 0.41
LIMS2-217ENST00000545738 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 GPR62Q9BZJ7 368 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 SLC28A3Q9HAS3 691 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 METTL14Q9HCE5 456 aaKnown RBP17.58■□□□□ 0.41
LIMS2-217ENST00000545738 FAN1Q9Y2M0 1017 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 TSC2P49815 1807 aa17.58■□□□□ 0.41
LIMS2-217ENST00000545738 C5orf67F2Z3F1 127 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 B3GAT3O94766 335 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 GNA14O95837 355 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 ALDH2P05091 517 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 ALDH7A1P49419 539 aaKnown RBP17.58■□□□□ 0.4
LIMS2-217ENST00000545738 ENPEPQ07075 957 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 CAMK1Q14012 370 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 KRT31Q15323 416 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 HABP4Q5JVS0 413 aaKnown RBP17.58■□□□□ 0.4
LIMS2-217ENST00000545738 TAS1R1Q7RTX1 841 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.4
LIMS2-217ENST00000545738 ARNTL2Q8WYA1 636 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 ANKRD36BP1Q96IX9 119 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 B3GALT6Q96L58 329 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 XYLT2Q9H1B5 865 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 ALG13Q9NP73 1137 aaKnown RBP17.58■□□□□ 0.4
LIMS2-217ENST00000545738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.4
LIMS2-217ENST00000545738 AGAP1Q9UPQ3 857 aa17.58■□□□□ 0.4
LIMS2-217ENST00000545738 FGF18O76093 207 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 KRT19P08727 400 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 MYL6P60660 151 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 KCNH2Q12809 1159 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 TUBGCP2Q9BSJ2 902 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 PI4K2AQ9BTU6 479 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 TMEM8AQ9HCN3 771 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 TAB2Q9NYJ8 693 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 ADAM28Q9UKQ2 775 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 ITGA11Q9UKX5 1188 aa17.57■□□□□ 0.4
LIMS2-217ENST00000545738 TMEM189-UBE2V1I3L0A0 370 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 LPXNO60711 386 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 FGFR1OPO95684 399 aaKnown RBP17.56■□□□□ 0.4
LIMS2-217ENST00000545738 TNNC2P02585 160 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 RPL9P32969 192 aaKnown RBP17.56■□□□□ 0.4
LIMS2-217ENST00000545738 FMO5P49326 533 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 AARSP49588 968 aaKnown RBP eCLIP17.56■□□□□ 0.4
LIMS2-217ENST00000545738 MXI1P50539 228 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 LILRA4P59901 499 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 TIGD5Q53EQ6 642 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 SPOPLQ6IQ16 392 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 GDPD5Q8WTR4 605 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 CACTINQ8WUQ7 758 aaKnown RBP17.56■□□□□ 0.4
LIMS2-217ENST00000545738 UROC1Q96N76 676 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 RBSNQ9H1K0 784 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 ZNF576Q9H609 170 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 PCDHGC5Q9Y5F6 944 aa17.56■□□□□ 0.4
LIMS2-217ENST00000545738 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.56■□□□□ 0.4
LIMS2-217ENST00000545738 GRM6O15303 877 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 XPOTO43592 962 aaKnown RBP17.55■□□□□ 0.4
LIMS2-217ENST00000545738 CSPG5O95196 566 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 HLA-DRAP01903 254 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 EEF1GP26641 437 aaKnown RBP17.55■□□□□ 0.4
LIMS2-217ENST00000545738 MTIF2P46199 727 aaKnown RBP17.55■□□□□ 0.4
LIMS2-217ENST00000545738 BIRC3Q13489 604 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 NCOA4Q13772 614 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 DCLRE1AQ6PJP8 1040 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 LMO3Q8TAP4 145 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 APOBEC3GQ9HC16 384 aaKnown RBP17.55■□□□□ 0.4
LIMS2-217ENST00000545738 SPG21Q9NZD8 308 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 PCDHB12Q9Y5F1 795 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 APBA1Q02410 837 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 PTPN21Q16825 1174 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 KRT39Q6A163 491 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 FUT10Q6P4F1 479 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 SPPL3Q8TCT6 385 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 DDX27Q96GQ7 796 aaKnown RBP17.55■□□□□ 0.4
LIMS2-217ENST00000545738 LIMA1Q9UHB6 759 aaKnown RBP17.55■□□□□ 0.4
LIMS2-217ENST00000545738 COQ4Q9Y3A0 265 aa17.55■□□□□ 0.4
LIMS2-217ENST00000545738 BECN2A8MW95 431 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 CAVIN2O95810 425 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 AFPP02771 609 aaKnown RBP17.54■□□□□ 0.4
LIMS2-217ENST00000545738 GTF2H1P32780 548 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 PLCB3Q01970 1234 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 GRIN2CQ14957 1233 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 MAN2A1Q16706 1144 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 FAM114A1Q8IWE2 563 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 FBXO22Q8NEZ5 403 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 FAM161BQ96MY7 647 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 VPS16Q9H269 839 aa17.54■□□□□ 0.4
LIMS2-217ENST00000545738 LRRC10BA6NIK2 292 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms