RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 KCNA1Q09470 495 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 MRPL58Q14197 206 aaKnown RBP18.39■□□□□ 0.53
HOXD8-204ENST00000544999 UVSSAQ2YD98 709 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 PPM1LQ5SGD2 360 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 SPATA1Q5VX52 437 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 JADE1Q6IE81 842 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 SLC8B1Q6J4K2 584 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 CNNM4Q6P4Q7 775 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 RSPO2Q6UXX9 243 aaPredicted RBP18.39■□□□□ 0.53
HOXD8-204ENST00000544999 TRIM67Q6ZTA4 783 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 RTL10Q7L3V2 364 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 BEST2Q8NFU1 509 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 POMGNT1Q8WZA1 660 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 TRIM9Q9C026 710 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 ASB7Q9H672 318 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 RCOR1Q9UKL0 485 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 PCDHB8Q9UN66 801 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 SORCS3Q9UPU3 1222 aa18.39■□□□□ 0.53
HOXD8-204ENST00000544999 TECTAO75443 2155 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 TBC1D4O60343 1298 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 ADSSP30520 456 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 CASP5P51878 434 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 TMEM130Q8N3G9 435 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 APPL2Q8NEU8 664 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 IKZF4Q9H2S9 585 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 TMEM206Q9H813 350 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 LIMD1Q9UGP4 676 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 HCN4Q9Y3Q4 1203 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 MYO10Q9HD67 2058 aa18.38■□□□□ 0.53
HOXD8-204ENST00000544999 TMEM221A6NGB7 291 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 M0QZQ0 153 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 M0R296 226 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 POLR2DO15514 142 aaKnown RBP18.37■□□□□ 0.53
HOXD8-204ENST00000544999 NFICP08651 508 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 POU2F2P09086 479 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 GARTP22102 1010 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 AARSP49588 968 aaKnown RBP eCLIP18.37■□□□□ 0.53
HOXD8-204ENST00000544999 GUCY2FP51841 1108 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 ROR1Q01973 937 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 MTMR3Q13615 1198 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 TMEM132DQ14C87 1099 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 ZNF280DQ6N043 979 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 CRELD2Q6UXH1 353 aaPredicted RBP18.37■□□□□ 0.53
HOXD8-204ENST00000544999 STXBP4Q6ZWJ1 553 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 BMP8AQ7Z5Y6 402 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 UBALD2Q8IYN6 164 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 SYCP3Q8IZU3 236 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 SLC7A14Q8TBB6 771 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 C7orf25Q9BPX7 421 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
HOXD8-204ENST00000544999 FGFBP2Q9BYJ0 223 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 RAPGEFL1Q9UHV5 662 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 C2CD2Q9Y426 696 aa18.37■□□□□ 0.53
HOXD8-204ENST00000544999 XYLBO75191 536 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 LDHAP00338 332 aaKnown RBP18.36■□□□□ 0.53
HOXD8-204ENST00000544999 PAX3P23760 479 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 ASIC1P78348 528 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 CTXN3Q4LDR2 81 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 HFE2Q6ZVN8 426 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 ZNF461Q8TAF7 563 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 FBXL5Q9UKA1 691 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 ZDHHC9Q9Y397 364 aa18.36■□□□□ 0.53
HOXD8-204ENST00000544999 WDR27A2RRH5 827 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 N4BP1O75113 896 aaKnown RBP18.35■□□□□ 0.53
HOXD8-204ENST00000544999 PRPF6O94906 941 aaKnown RBP18.35■□□□□ 0.53
HOXD8-204ENST00000544999 ABLIM3O94929 683 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 IL18RAPO95256 599 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 ASGR2P07307 311 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 GBP2P32456 591 aaPredicted RBP18.35■□□□□ 0.53
HOXD8-204ENST00000544999 C9orf57Q5W0N0 161 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 DSTYKQ6XUX3 929 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 NT5DC4Q86YG4 428 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 ASIC4Q96FT7 647 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 MFSD14AQ96MC6 490 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 OXCT2Q9BYC2 517 aaPredicted RBP18.35■□□□□ 0.53
HOXD8-204ENST00000544999 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.35■□□□□ 0.53
HOXD8-204ENST00000544999 EPS15L1Q9UBC2 864 aa18.35■□□□□ 0.53
HOXD8-204ENST00000544999 ARIH1Q9Y4X5 557 aaPredicted RBP18.35■□□□□ 0.53
HOXD8-204ENST00000544999 DOCK8Q8NF50 2099 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 ANO9A1A5B4 782 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 PIRO00625 290 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 PPEF2O14830 753 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 EIF3DO15371 548 aaKnown RBP eCLIP18.34■□□□□ 0.53
HOXD8-204ENST00000544999 CCL16O15467 120 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 ATF2P15336 505 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 ELF1P32519 619 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 LILRA4P59901 499 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 KRT85P78386 507 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 YWHAHQ04917 246 aaPredicted RBP18.34■□□□□ 0.53
HOXD8-204ENST00000544999 TPGS2Q68CL5 300 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 UNC13DQ70J99 1090 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 GET4Q7L5D6 327 aaPredicted RBP18.34■□□□□ 0.53
HOXD8-204ENST00000544999 GRASPQ7Z6J2 395 aaPredicted RBP18.34■□□□□ 0.53
HOXD8-204ENST00000544999 BRSK2Q8IWQ3 736 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 MYADMQ96S97 322 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 FAM213AQ9BRX8 229 aa18.34■□□□□ 0.53
HOXD8-204ENST00000544999 IGSF9Q9P2J2 1179 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms