RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZNF280BQ86YH2 543 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 RHPN2Q8IUC4 686 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 KSR1Q8IVT5 923 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 C12orf56Q8IXR9 622 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 ZNF507Q8TCN5 953 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 PIGOQ8TEQ8 1089 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 ANP32BQ92688 251 aaKnown RBP7.18□□□□□ -1.26
CDCA3-209ENST00000544610 ACSF2Q96CM8 615 aaPredicted RBP7.18□□□□□ -1.26
CDCA3-209ENST00000544610 PGBD4Q96DM1 585 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 CEP170P1Q96L14 293 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 NLRP4Q96MN2 994 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 KLHL5Q96PQ7 755 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 SH2D3AQ9BRG2 576 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 REEP2Q9BRK0 252 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 STRA6Q9BX79 667 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 MFSD1Q9H3U5 465 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 TMEM206Q9H813 350 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 IFT122Q9HBG6 1241 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 DUSP12Q9UNI6 340 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 TRAF3IP3Q9Y228 551 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 INPP5FQ9Y2H2 1132 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 PCDHB2Q9Y5E7 798 aa7.18□□□□□ -1.26
CDCA3-209ENST00000544610 PPP1R3GB7ZBB8 358 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GOLGA6L19H0YKK7 550 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 PDXKO00764 312 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 DDHD2O94830 711 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GNA14O95837 355 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 SSBP05455 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CNPP09543 421 aaKnown RBP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 NUDT7P0C024 238 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 IDEP14735 1019 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 ZNF18P17022 549 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 NPR3P17342 541 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 AOC1P19801 751 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CCNE1P24864 410 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 ARL2P36404 184 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 PRCPP42785 496 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 NAMPTP43490 491 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 AFF1P51825 1210 aaKnown RBP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 NCKAP1LP55160 1127 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GTF2BQ00403 316 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 DMP1Q13316 513 aaPredicted RBP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 TDGQ13569 410 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 UBXN11Q5T124 520 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 PLA2G4FQ68DD2 849 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 ZNF720Q7Z2F6 126 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 FRMD5Q7Z6J6 570 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 MRPL10Q7Z7H8 261 aaKnown RBP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GAS2L3Q86XJ1 694 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 SLC9A9Q8IVB4 645 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 FAM114A1Q8IWE2 563 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 ZC3H3Q8IXZ2 948 aaKnown RBP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CCDC105Q8IYK2 499 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GRAMD1CQ8IYS0 662 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 DAW1Q8N136 415 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 FLCNQ8NFG4 579 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CMASQ8NFW8 434 aaPredicted RBP7.17□□□□□ -1.26
CDCA3-209ENST00000544610 URGCPQ8TCY9 931 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 IFT74Q96LB3 600 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 FIZ1Q96SL8 496 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 PLIN2Q99541 437 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 TMEM175Q9BSA9 504 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 RUSC1Q9BVN2 902 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GBP3Q9H0R5 595 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 DNAJC25Q9H1X3 360 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 C2orf40Q9H1Z8 148 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 BLZF1Q9H2G9 400 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 TMEM134Q9H6X4 195 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 RSAD1Q9HA92 442 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 GRPEL1Q9HAV7 217 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 KCNK12Q9HB15 430 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CBX8Q9HC52 389 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 MARCH5Q9NX47 278 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 TBC1D7Q9P0N9 293 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 KANSL3Q9P2N6 904 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 EXOC7Q9UPT5 735 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 CNTNAP2Q9UHC6 1331 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 MYH11P35749 1972 aa7.17□□□□□ -1.26
CDCA3-209ENST00000544610 ARID2Q68CP9 1835 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 NRP1O14786 923 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 MAPK13O15264 365 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 INPPL1O15357 1258 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 N4BP1O75113 896 aaKnown RBP7.16□□□□□ -1.26
CDCA3-209ENST00000544610 HIP1RO75146 1068 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 PAPLNO95428 1278 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 EFEMP2O95967 443 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 PIGRP01833 764 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 SOD2P04179 222 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 TPM3P06753 285 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 RPL13P26373 211 aaKnown RBP7.16□□□□□ -1.26
CDCA3-209ENST00000544610 EEF1GP26641 437 aaKnown RBP7.16□□□□□ -1.26
CDCA3-209ENST00000544610 KLRC2P26717 231 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 HOXA11P31270 313 aaPredicted RBP7.16□□□□□ -1.26
CDCA3-209ENST00000544610 NPEPPSP55786 919 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 MARSP56192 900 aaKnown RBP7.16□□□□□ -1.26
CDCA3-209ENST00000544610 USP46P62068 366 aa7.16□□□□□ -1.26
CDCA3-209ENST00000544610 FKBP3Q00688 224 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms