RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 HOMER3Q9NSC5 361 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 GMNCA6NCL1 334 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 FAM189A1O60320 539 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 GNA15P30679 374 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 KCNJ1P48048 391 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 STAT5BP51692 787 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 CDR1P51861 262 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 VGLL4Q14135 290 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 SLC29A2Q14542 456 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 C6orf118Q5T5N4 469 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 TRMT10CQ7L0Y3 403 aaKnown RBP18.88■□□□□ 0.61
SCARB1-208ENST00000544327 YTHDF3Q7Z739 585 aaKnown RBP18.88■□□□□ 0.61
SCARB1-208ENST00000544327 GPC2Q8N158 579 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 OR5B17Q8NGF7 314 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 GRK7Q8WTQ7 553 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 PPM1EQ8WY54 764 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 SEPT1Q8WYJ6 367 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 DCLK3Q9C098 648 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 CCDC113Q9H0I3 377 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 ADAM22Q9P0K1 906 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 PPP1R1BQ9UD71 204 aaPredicted RBP18.88■□□□□ 0.61
SCARB1-208ENST00000544327 NUB1Q9Y5A7 615 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 DICER1Q9UPY3 1922 aaKnown RBP18.87■□□□□ 0.61
SCARB1-208ENST00000544327 C5orf60A6NFR6 353 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 DCDC2CA8MYV0 355 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 RIPK2O43353 540 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 GAS2O43903 313 aaKnown RBP18.87■□□□□ 0.61
SCARB1-208ENST00000544327 ITIH2P19823 946 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 SEC24CP53992 1094 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 KRT17Q04695 432 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 CALCOCO2Q13137 446 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 KLF1Q13351 362 aaPredicted RBP18.87■□□□□ 0.61
SCARB1-208ENST00000544327 MAMLD1Q13495 774 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 NCOA4Q13772 614 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 PPP1R7Q15435 360 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 SKIDA1Q1XH10 827 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 TNFAIP8L3Q5GJ75 292 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 IER5Q5VY09 327 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 TMEM270Q6UE05 265 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 METTL7BQ6UX53 244 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 WDR49Q8IV35 697 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 RHOT1Q8IXI2 618 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 KATNAL2Q8IYT4 538 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.87■□□□□ 0.61
SCARB1-208ENST00000544327 SEMA4AQ9H3S1 761 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 ANKFY1Q9P2R3 1169 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 OTOFQ9HC10 1997 aa18.87■□□□□ 0.61
SCARB1-208ENST00000544327 E7EVH7 732 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 TP73O15350 636 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 ASS1P00966 412 aaKnown RBP18.86■□□□□ 0.61
SCARB1-208ENST00000544327 AGTP01019 485 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 CAV1Q03135 178 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 C1orf54Q8WWF1 131 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 MRPL4Q9BYD3 311 aaKnown RBP18.86■□□□□ 0.61
SCARB1-208ENST00000544327 SPATC1LQ9H0A9 340 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 PTPN22Q9Y2R2 807 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 MSCO60682 206 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 LGR5O75473 907 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 TOM1L1O75674 476 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 IVDP26440 423 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 TMOD1P28289 359 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 MMP13P45452 471 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 ARMC9Q7Z3E5 817 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 TADA2BQ86TJ2 420 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 EXOC8Q8IYI6 725 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 RAPGEF5Q92565 580 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 C11orf70Q9BRQ4 267 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 HERPUD2Q9BSE4 406 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 ROPN1BQ9BZX4 212 aaPredicted RBP18.86■□□□□ 0.61
SCARB1-208ENST00000544327 ROPN1Q9HAT0 212 aaPredicted RBP18.86■□□□□ 0.61
SCARB1-208ENST00000544327 CHST7Q9NS84 486 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 NEU2Q9Y3R4 380 aa18.86■□□□□ 0.61
SCARB1-208ENST00000544327 IRF6O14896 467 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 LSM8O95777 96 aaKnown RBP18.85■□□□□ 0.61
SCARB1-208ENST00000544327 CFHP08603 1231 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 SURF1Q15526 300 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 ATL2Q8NHH9 583 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 EXD1Q8NHP7 514 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 TCP11Q8WWU5 503 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 BBXQ8WY36 941 aaPredicted RBP18.85■□□□□ 0.61
SCARB1-208ENST00000544327 SNF8Q96H20 258 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 IMPG2Q9BZV3 1241 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 STMN4Q9H169 189 aaPredicted RBP18.85■□□□□ 0.61
SCARB1-208ENST00000544327 AAASQ9NRG9 546 aa18.85■□□□□ 0.61
SCARB1-208ENST00000544327 GOLGB1Q14789 3259 aaKnown RBP18.85■□□□□ 0.61
SCARB1-208ENST00000544327 IGKV6-21A0A0C4DH24 114 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 RGS16O15492 202 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-208ENST00000544327 MEFVO15553 781 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-208ENST00000544327 THAP12O43422 761 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 GAS8O95995 478 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 MMP8P22894 467 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 TCF7P36402 384 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-208ENST00000544327 CCNG2Q16589 344 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 ERMARDQ5T6L9 678 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 LLGL2Q6P1M3 1020 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 KCNV1Q6PIU1 500 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 FEZF2Q8TBJ5 459 aa18.84■□□□□ 0.61
SCARB1-208ENST00000544327 PRPF31Q8WWY3 499 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms