RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 KCNB1Q14721 858 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 GLYCTKQ8IVS8 523 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 SUSD3Q96L08 255 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 FBXL18Q96ME1 805 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 APOL5Q9BWW9 433 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 DZANK1Q9NVP4 752 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 PDCD11Q14690 1871 aaKnown RBP23.61■■□□□ 1.37
OTUB1-212ENST00000543988 ADAM12O43184 909 aa23.6■■□□□ 1.37
OTUB1-212ENST00000543988 HOXB8P17481 243 aaPredicted RBP23.6■■□□□ 1.37
OTUB1-212ENST00000543988 C9orf57Q5W0N0 161 aa23.6■■□□□ 1.37
OTUB1-212ENST00000543988 C12orf56Q8IXR9 622 aa23.6■■□□□ 1.37
OTUB1-212ENST00000543988 TIGD1Q96MW7 591 aa23.6■■□□□ 1.37
OTUB1-212ENST00000543988 KCTD10Q9H3F6 313 aa23.6■■□□□ 1.37
OTUB1-212ENST00000543988 PDE11AQ9HCR9 933 aa23.6■■□□□ 1.37
OTUB1-212ENST00000543988 CGNQ9P2M7 1197 aaKnown RBP23.6■■□□□ 1.37
OTUB1-212ENST00000543988 USP15Q9Y4E8 981 aaPredicted RBP23.6■■□□□ 1.37
OTUB1-212ENST00000543988 GLUD1P00367 558 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 AARSP49588 968 aaKnown RBP eCLIP23.59■■□□□ 1.37
OTUB1-212ENST00000543988 TFAMQ00059 246 aaKnown RBP23.59■■□□□ 1.37
OTUB1-212ENST00000543988 SNRNP35Q16560 246 aaKnown RBP23.59■■□□□ 1.37
OTUB1-212ENST00000543988 PDXDC1Q6P996 788 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 C12orf76Q8N812 135 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-212ENST00000543988 GOLGA5Q8TBA6 731 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 ERCC4Q92889 916 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-212ENST00000543988 UHRF1Q96T88 793 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-212ENST00000543988 CLSTN3Q9BQT9 956 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 S1PR5Q9H228 398 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 KIAA1586Q9HCI6 787 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 TSHZ2Q9NRE2 1034 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 DPP3Q9NY33 737 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 MTRRQ9UBK8 725 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 FAM50BQ9Y247 325 aa23.59■■□□□ 1.37
OTUB1-212ENST00000543988 ANO9A1A5B4 782 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 ZNF233A6NK53 670 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 SYN3O14994 580 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 KINO60870 393 aaKnown RBP23.58■■□□□ 1.37
OTUB1-212ENST00000543988 SMAD2Q15796 467 aaKnown RBP23.58■■□□□ 1.37
OTUB1-212ENST00000543988 VARS2Q5ST30 1063 aaKnown RBP23.58■■□□□ 1.37
OTUB1-212ENST00000543988 PALB2Q86YC2 1186 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 NT5DC4Q86YG4 428 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 XXYLT1Q8NBI6 393 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 MAN1C1Q9NR34 630 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 CDH22Q9UJ99 828 aa23.58■■□□□ 1.37
OTUB1-212ENST00000543988 PTPRJQ12913 1337 aa23.58■■□□□ 1.36
OTUB1-212ENST00000543988 PIRO00625 290 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 SPTLC1O15269 473 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 TGM5O43548 720 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 RARS2Q5T160 578 aaKnown RBP23.57■■□□□ 1.36
OTUB1-212ENST00000543988 LMBRD2Q68DH5 695 aaPredicted RBP23.57■■□□□ 1.36
OTUB1-212ENST00000543988 RSPO2Q6UXX9 243 aaPredicted RBP23.57■■□□□ 1.36
OTUB1-212ENST00000543988 ANKS3Q6ZW76 656 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 SMYD4Q8IYR2 804 aaPredicted RBP23.57■■□□□ 1.36
OTUB1-212ENST00000543988 SUSD6Q92537 303 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 PCDHB8Q9UN66 801 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 MAPK8IP1Q9UQF2 711 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 BACE2Q9Y5Z0 518 aa23.57■■□□□ 1.36
OTUB1-212ENST00000543988 M0QZQ0 153 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 SPATA31D3P0C874 917 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 LILRA4P59901 499 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 UBE2HP62256 183 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 LILRA6Q6PI73 481 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 SPATA31D4Q6ZUB0 917 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 C1orf127Q8N9H9 656 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 RDH13Q8NBN7 331 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 FEZF2Q8TBJ5 459 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 IPO9Q96P70 1041 aaKnown RBP23.56■■□□□ 1.36
OTUB1-212ENST00000543988 MTMR12Q9C0I1 747 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 SFXN1Q9H9B4 322 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 CDY1Q9Y6F8 540 aa23.56■■□□□ 1.36
OTUB1-212ENST00000543988 VWA8A3KMH1 1905 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 PDXKO00764 312 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 EXOC3O60645 756 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 SMC2O95347 1197 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 CYP24A1Q07973 514 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 GUF1Q8N442 669 aaKnown RBP23.55■■□□□ 1.36
OTUB1-212ENST00000543988 APPL2Q8NEU8 664 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 SPATA20Q8TB22 786 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 SMARCE1Q969G3 411 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 DMAC2Q9NW81 257 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 RMND1Q9NWS8 449 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 HOOK1Q9UJC3 728 aaKnown RBP23.55■■□□□ 1.36
OTUB1-212ENST00000543988 PCDHA5Q9Y5H7 936 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 TIMM13Q9Y5L4 95 aaPredicted RBP23.55■■□□□ 1.36
OTUB1-212ENST00000543988 ANK1P16157 1881 aa23.55■■□□□ 1.36
OTUB1-212ENST00000543988 SPDYE4A6NLX3 237 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 KIF20AO95235 890 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 C1RP00736 705 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 NR3C1P04150 777 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 WEE2P0C1S8 567 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 POLR2BP30876 1174 aaKnown RBP23.54■■□□□ 1.36
OTUB1-212ENST00000543988 OR1D2P34982 312 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 RAB33AQ14088 237 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 MRPL58Q14197 206 aaKnown RBP23.54■■□□□ 1.36
OTUB1-212ENST00000543988 SCARA3Q6AZY7 606 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 TMC5Q6UXY8 1006 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 DSTYKQ6XUX3 929 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 OR5B17Q8NGF7 314 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 CXorf38Q8TB03 319 aa23.54■■□□□ 1.36
OTUB1-212ENST00000543988 CACTINQ8WUQ7 758 aaKnown RBP23.54■■□□□ 1.36
OTUB1-212ENST00000543988 GSDMAQ96QA5 445 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms