RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 FNTAP49354 379 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 HUNKP57058 714 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 NOMO3P69849 1222 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 HSDL1Q3SXM5 330 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 LLGL2Q6P1M3 1020 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 PHLDB2Q86SQ0 1253 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 RBBP8NLQ8NC74 664 aaPredicted RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 FBXO25Q8TCJ0 367 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 RSPH14Q9UHP6 348 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 DNAH12Q6ZR08 3092 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 TOM1L1O75674 476 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 CFHP08603 1231 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 TNFSF9P41273 254 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 RPL21P46778 160 aaKnown RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 C2CD6Q53TS8 623 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 CDCA2Q69YH5 1023 aaPredicted RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSH2-206ENST00000543555 TRIM50Q86XT4 487 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 PASD1Q8IV76 773 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 CCDC105Q8IYK2 499 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 TCP11Q8WWU5 503 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 SPDYE5A6NIY4 337 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 FSCN2O14926 492 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 LGR5O75473 907 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 AP3M2P53677 418 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 LAMTOR4Q0VGL1 99 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 CELF3Q5SZQ8 465 aaKnown RBP14.83□□□□□ -0.04
MSH2-206ENST00000543555 LIN9Q5TKA1 542 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 KCNV1Q6PIU1 500 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.04
MSH2-206ENST00000543555 WDR49Q8IV35 697 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 BCAS4Q8TDM0 211 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 LRRC19Q9H756 370 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 TXNRD2Q9NNW7 524 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 PARP2Q9UGN5 583 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 GAS2O43903 313 aaKnown RBP14.83□□□□□ -0.04
MSH2-206ENST00000543555 CYP2C8P10632 490 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 ZBTB33Q86T24 672 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 ACO2Q99798 780 aaKnown RBP14.83□□□□□ -0.04
MSH2-206ENST00000543555 C11orf70Q9BRQ4 267 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 TCHPQ9BT92 498 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 IMPG2Q9BZV3 1241 aa14.83□□□□□ -0.04
MSH2-206ENST00000543555 IGKV6-21A0A0C4DH24 114 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 ZBTB42B2RXF5 422 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 NOP56O00567 594 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 SRGAP2CP0DJJ0 459 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 MXD4Q14582 209 aaPredicted RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 AGBL2Q5U5Z8 902 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 SCARA3Q6AZY7 606 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 SRLQ86TD4 932 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 ZBTB8OSQ8IWT0 167 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 RNF149Q8NC42 400 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 VCPIP1Q96JH7 1222 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 ADAM22Q9P0K1 906 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 RBPJLQ9UBG7 517 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 THAP12O43422 761 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 PROSCO94903 275 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 ASS1P00966 412 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 PRKCBP05771 671 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 KCNJ1P48048 391 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 PMS2P54278 862 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 EIF3BP55884 814 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 HTRA3P83110 453 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 GUCY1A3Q02108 690 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 PLPPR4Q7Z2D5 763 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 PHF13Q86YI8 300 aaPredicted RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 LRRC71Q8N4P6 559 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 ARFGAP2Q8N6H7 521 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 UBR7Q8N806 425 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 C2orf69Q8N8R5 385 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 EPB41L4BQ9H329 900 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 KCNH4Q9UQ05 1017 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 PTPN22Q9Y2R2 807 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.82□□□□□ -0.04
MSH2-206ENST00000543555 PASKQ96RG2 1323 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 DNAJC25-GNG10A0A024R161 153 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 OGTO15294 1046 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 CST3P01034 146 aaPredicted RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 SSTR3P32745 418 aaPredicted RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 ZNF132P52740 706 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 LLGL1Q15334 1064 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 MAPK6Q16659 721 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 Q3C1V9 767 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 EXOC8Q8IYI6 725 aa14.82□□□□□ -0.04
MSH2-206ENST00000543555 PABPC3Q9H361 631 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 MRPL47Q9HD33 250 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 MTRF1LQ9UGC7 380 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 RRP15Q9Y3B9 282 aaKnown RBP14.82□□□□□ -0.04
MSH2-206ENST00000543555 ABLIM1O14639 778 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 KIF3CO14782 793 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 ECEL1O95672 775 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 NUDT17P0C025 328 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 HPDP32754 393 aaPredicted RBP14.81□□□□□ -0.04
MSH2-206ENST00000543555 LSP1P33241 339 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 MDH1P40925 334 aaKnown RBP14.81□□□□□ -0.04
MSH2-206ENST00000543555 MCL1Q07820 350 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 IFFO1Q0D2I5 559 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms