RNA–Protein interactions for RNA: ENST00000543543.5

HMBS-217, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-217ENST00000543543 SQORQ9Y6N5 450 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 FANCGO15287 622 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 CSDE1O75534 798 aaKnown RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 ABL1P00519 1130 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 PNMA6AP0CW24 399 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 KRT5P13647 590 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 ZSCAN20P17040 1043 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 ACO1P21399 889 aaKnown RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 HADHBP55084 474 aaKnown RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 TRIM32Q13049 653 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 SLC10A6Q3KNW5 377 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 RHOT2Q8IXI1 618 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 EFCAB13Q8IY85 973 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 HACE1Q8IYU2 909 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 SYCE1Q8N0S2 351 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 CEP120Q8N960 986 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 OLIG1Q8TAK6 271 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 RFFLQ8WZ73 363 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 KAT5Q92993 513 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 PPP1R16BQ96T49 567 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 PI4K2AQ9BTU6 479 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 TRIM6Q9C030 488 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 CYP3A43Q9HB55 503 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
HMBS-217ENST00000543543 NUB1Q9Y5A7 615 aa11.77□□□□□ -0.53
HMBS-217ENST00000543543 NCANO14594 1321 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 SGPL1O95470 568 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 NPTXRO95502 500 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 TCP1P17987 556 aaKnown RBP11.76□□□□□ -0.53
HMBS-217ENST00000543543 GALCP54803 685 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 OSTNP61366 133 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 RBP5P82980 135 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 PTK7Q13308 1070 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 MTFR1Q15390 333 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 JADE1Q6IE81 842 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 NOP9Q86U38 636 aaKnown RBP11.76□□□□□ -0.53
HMBS-217ENST00000543543 CDR2LQ86X02 465 aaPredicted RBP11.76□□□□□ -0.53
HMBS-217ENST00000543543 RPUSD2Q8IZ73 545 aaKnown RBP11.76□□□□□ -0.53
HMBS-217ENST00000543543 UBR7Q8N806 425 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 ARRDC4Q8NCT1 418 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 MNS1Q8NEH6 495 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 RPGRIP1Q96KN7 1286 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 XYLT2Q9H1B5 865 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 APOBEC3GQ9HC16 384 aaKnown RBP11.76□□□□□ -0.53
HMBS-217ENST00000543543 RNF14Q9UBS8 474 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 GINS2Q9Y248 185 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 SAR1BQ9Y6B6 198 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
HMBS-217ENST00000543543 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 MYBL1P10243 752 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 ZNF132P52740 706 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 NAP1L1P55209 391 aaKnown RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 MYL6P60660 151 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 ZNF200P98182 395 aaPredicted RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 AMPD2Q01433 879 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 GABPB1Q06547 395 aaPredicted RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 TMEM62Q0P6H9 643 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 FAM47CQ5HY64 1035 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 SLC47A2Q86VL8 602 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 DDX1Q92499 740 aaKnown RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 SNX27Q96L92 541 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 ARID3AQ99856 593 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 SEPT11Q9NVA2 429 aaKnown RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 CNTN3Q9P232 1028 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 PIN4Q9Y237 131 aaKnown RBP11.75□□□□□ -0.53
HMBS-217ENST00000543543 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
HMBS-217ENST00000543543 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 GPR182O15218 404 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 MOCS3O95396 460 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 CD4P01730 458 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 NFICP08651 508 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 CHRNB2P17787 502 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 CYP3A5P20815 502 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 GRK4P32298 578 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 ACLYP53396 1101 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 GPC5P78333 572 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 CBX1P83916 185 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 FMO1Q01740 532 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
HMBS-217ENST00000543543 MYO1EQ12965 1108 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 ALKAL1Q6UXT8 129 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 TMEM192Q8IY95 271 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 C1orf127Q8N9H9 656 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 BEST2Q8NFU1 509 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 SLC20A1Q8WUM9 679 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 VCPIP1Q96JH7 1222 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 GLT1D1Q96MS3 346 aa11.74□□□□□ -0.53
HMBS-217ENST00000543543 BCO2Q9BYV7 579 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms