RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 USP20Q9Y2K6 914 aa12.42□□□□□ -0.42
COPS7A-217ENST00000543537 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 IL9P15248 144 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 AXLP30530 894 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 HOXD13P35453 343 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 CASP5P51878 434 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 ADKP55263 362 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 PTENP60484 403 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 SMAD4Q13485 552 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 SPA17Q15506 151 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 SPOUT1Q5T280 376 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 TWF2Q6IBS0 349 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 TMEM184AQ6ZMB5 413 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 CATSPER4Q7RTX7 472 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 THNSL1Q8IYQ7 743 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 SMRP1Q8NCR6 262 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 TMEM143Q96AN5 459 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 BORCS6Q96GS4 357 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 CCDC42Q96M95 316 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 ZNF558Q96NG5 402 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 TTYH3Q9C0H2 523 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 PLXNA4Q9HCM2 1894 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 NGRNQ9NPE2 291 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 CD320Q9NPF0 282 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 PUF60Q9UHX1 559 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 PIN4Q9Y237 131 aaKnown RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 EPN1Q9Y6I3 576 aaPredicted RBP12.41□□□□□ -0.42
COPS7A-217ENST00000543537 STYXL1Q9Y6J8 313 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 ARID2Q68CP9 1835 aa12.41□□□□□ -0.42
COPS7A-217ENST00000543537 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 INPPL1O15357 1258 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 AKAP3O75969 853 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 GLP2RO95838 553 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
COPS7A-217ENST00000543537 ERVFC1P60507 584 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 ZP2Q05996 745 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 BFSP1Q12934 665 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 DUSP6Q16828 381 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 ADGRD2Q7Z7M1 963 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 GJD3Q8N144 294 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 FBXL18Q96ME1 805 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 POLR3FQ9H1D9 316 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-217ENST00000543537 HAUS4Q9H6D7 363 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 SPG21Q9NZD8 308 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 CLEC1BQ9P126 229 aa12.4□□□□□ -0.42
COPS7A-217ENST00000543537 CNTNAP2Q9UHC6 1331 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
COPS7A-217ENST00000543537 SLC16A4O15374 487 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 LINC01565O15544 149 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 MBTPS2O43462 519 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 KRT86O43790 486 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 KIF5CO60282 957 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
COPS7A-217ENST00000543537 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 TNNT1P13805 278 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 LIG4P49917 911 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 VAMP7P51809 220 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ETF1P62495 437 aaKnown RBP12.39□□□□□ -0.43
COPS7A-217ENST00000543537 KRT17Q04695 432 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
COPS7A-217ENST00000543537 MAPK6Q16659 721 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 AMHR2Q16671 573 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ZC2HC1CQ53FD0 456 aaPredicted RBP12.39□□□□□ -0.43
COPS7A-217ENST00000543537 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 SFMBT2Q5VUG0 894 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 TCERG1LQ5VWI1 586 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ENOSF1Q7L5Y1 443 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 TMEM139Q8IV31 216 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ADHFE1Q8IWW8 467 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 GLIS3Q8NEA6 775 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 JAKMIP2Q96AA8 810 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 PGBD4Q96DM1 585 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 BICD1Q96G01 975 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
COPS7A-217ENST00000543537 HSPBP1Q9NZL4 362 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 AIPL1Q9NZN9 384 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 STK39Q9UEW8 545 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 CD207Q9UJ71 328 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 PPP2R2CQ9Y2T4 447 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 IRAK3Q9Y616 596 aa12.39□□□□□ -0.43
COPS7A-217ENST00000543537 ATP8B3O60423 1300 aa12.38□□□□□ -0.43
COPS7A-217ENST00000543537 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
COPS7A-217ENST00000543537 EXTL3O43909 919 aa12.38□□□□□ -0.43
COPS7A-217ENST00000543537 SERPING1P05155 500 aa12.38□□□□□ -0.43
COPS7A-217ENST00000543537 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
COPS7A-217ENST00000543537 GLRA2P23416 452 aa12.38□□□□□ -0.43
COPS7A-217ENST00000543537 NRIP1P48552 1158 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms