RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 AARSP49588 968 aaKnown RBP eCLIP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 TMEM87AQ8NBN3 555 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 ZNF707Q96C28 371 aaPredicted RBP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 SUSD3Q96L08 255 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 FAM213AQ9BRX8 229 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 PHF7Q9BWX1 381 aaPredicted RBP12.51□□□□□ -0.41
C2CD3-217ENST00000542452 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 UBE4BO95155 1302 aa12.51□□□□□ -0.41
C2CD3-217ENST00000542452 PVALEFA0A1B0GWK0 134 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 TBC1D4O60343 1298 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 PAPLNO95428 1278 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 MCM4P33991 863 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 ITIH3Q06033 890 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 STK4Q13043 487 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 MRPL58Q14197 206 aaKnown RBP12.5□□□□□ -0.41
C2CD3-217ENST00000542452 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 KMT5BQ4FZB7 885 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 C9orf57Q5W0N0 161 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 ARMCX5Q6P1M9 558 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 KRBA2Q6ZNG9 492 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 GPR149Q86SP6 731 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 CBWD2Q8IUF1 395 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 CD302Q8IX05 232 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
C2CD3-217ENST00000542452 ASB7Q9H672 318 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 EPHX3Q9H6B9 360 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 AGPAT3Q9NRZ7 376 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 DERAQ9Y315 318 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 C2CD2Q9Y426 696 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 CDY1Q9Y6F8 540 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 PTPRJQ12913 1337 aa12.5□□□□□ -0.41
C2CD3-217ENST00000542452 ANO9A1A5B4 782 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 C2CD4DB7Z1M9 353 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 M0QZQ0 153 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 PIRO00625 290 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 SYN3O14994 580 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 EXTL3O43909 919 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 OR1D2P34982 312 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 ROR1Q01973 937 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 CREMQ03060 361 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 DPYDQ12882 1025 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 POSTNQ15063 836 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 LMBRD2Q68DH5 695 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-217ENST00000542452 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 KREMEN2Q8NCW0 462 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 BEST2Q8NFU1 509 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-217ENST00000542452 CXorf38Q8TB03 319 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 GZF1Q9H116 711 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-217ENST00000542452 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 RBAKQ9NYW8 714 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-217ENST00000542452 HSPBP1Q9NZL4 362 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 USP25Q9UHP3 1055 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-217ENST00000542452 BACE2Q9Y5Z0 518 aa12.49□□□□□ -0.41
C2CD3-217ENST00000542452 WDR27A2RRH5 827 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 CLIC2O15247 247 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 TRAPPC3O43617 180 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 ZNF202O95125 648 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 MTHFRP42898 656 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 POU5F1Q01860 360 aaKnown RBP12.48□□□□□ -0.41
C2CD3-217ENST00000542452 RAB33AQ14088 237 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 SLC8B1Q6J4K2 584 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 CES5AQ6NT32 575 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 ANKS3Q6ZW76 656 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 RNF135Q8IUD6 432 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 FMR1NBQ8N0W7 255 aaPredicted RBP12.48□□□□□ -0.41
C2CD3-217ENST00000542452 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 ENGASEQ8NFI3 743 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
C2CD3-217ENST00000542452 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
C2CD3-217ENST00000542452 PDE11AQ9HCR9 933 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 MUTYHQ9UIF7 546 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 FBXL5Q9UKA1 691 aa12.48□□□□□ -0.41
C2CD3-217ENST00000542452 TECTAO75443 2155 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 CCDC195A0A1B0GUA6 201 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 XPOTO43592 962 aaKnown RBP12.47□□□□□ -0.41
C2CD3-217ENST00000542452 N4BP1O75113 896 aaKnown RBP12.47□□□□□ -0.41
C2CD3-217ENST00000542452 ZMYND10O75800 440 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 IL18RAPO95256 599 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 VNN2O95498 520 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
C2CD3-217ENST00000542452 C1RP00736 705 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
C2CD3-217ENST00000542452 C8AP07357 584 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 LILRA4P59901 499 aa12.47□□□□□ -0.41
C2CD3-217ENST00000542452 SNW1Q13573 536 aaKnown RBP12.47□□□□□ -0.41
C2CD3-217ENST00000542452 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms