RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 YIPF3Q9GZM5 350 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 C10orf88Q9H8K7 445 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 MYOZ2Q9NPC6 264 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 NKX1-2Q9UD57 310 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-208ENST00000542068 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 EXOC1LA0A1B0GW35 172 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 CBX6O95503 412 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 GBP1P32455 592 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 SPOPLQ6IQ16 392 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 GLIS1Q8NBF1 620 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 TMEM143Q96AN5 459 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 RIT2Q99578 217 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 ROPN1BQ9BZX4 212 aaPredicted RBP16.27■□□□□ 0.2
CNOT9-208ENST00000542068 ROPN1Q9HAT0 212 aaPredicted RBP16.27■□□□□ 0.2
CNOT9-208ENST00000542068 AGO4Q9HCK5 861 aaKnown RBP16.27■□□□□ 0.2
CNOT9-208ENST00000542068 GOLGA8RI6L899 631 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 GGPS1O95749 300 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 CFHP08603 1231 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 MMP14P50281 582 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 ZNF131P52739 623 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 FASTKD3Q14CZ7 662 aaKnown RBP16.27■□□□□ 0.2
CNOT9-208ENST00000542068 P3H1Q32P28 736 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
CNOT9-208ENST00000542068 RBM15Q96T37 977 aaKnown RBP eCLIP16.27■□□□□ 0.27e-7■■□□□ 13
CNOT9-208ENST00000542068 PLVAPQ9BX97 442 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 DCTN4Q9UJW0 460 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 GTF3C4Q9UKN8 822 aa16.27■□□□□ 0.2
CNOT9-208ENST00000542068 KIF1CO43896 1103 aaKnown RBP16.27■□□□□ 0.19
CNOT9-208ENST00000542068 ITIH2P19823 946 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 ATP5DP30049 168 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 MFSD5Q6N075 450 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 ARHGEF18Q6ZSZ5 1173 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 ANKMY2Q8IV38 441 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 FBF1Q8TES7 1133 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 WRNIP1Q96S55 665 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.19
CNOT9-208ENST00000542068 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.19
CNOT9-208ENST00000542068 SLC26A4O43511 780 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
CNOT9-208ENST00000542068 NPTX2P47972 431 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 SETDB1Q15047 1291 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 ANKRD20A2Q5SQ80 823 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 ANKRD20A1Q5TYW2 823 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 ANKRD20A3Q5VUR7 823 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 FMNL3Q8IVF7 1028 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 PSPC1Q8WXF1 523 aaKnown RBP16.26■□□□□ 0.19
CNOT9-208ENST00000542068 LRRC19Q9H756 370 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 EBF2Q9HAK2 575 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 ZNF148Q9UQR1 794 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 SLX4Q8IY92 1834 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 CCNE2O96020 404 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 TAC1P20366 129 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 WDR4P57081 412 aaKnown RBP16.26■□□□□ 0.19
CNOT9-208ENST00000542068 CDR2Q01850 454 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 OVGP1Q12889 678 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 SYCP2LQ5T4T6 812 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 CCDC77Q9BR77 488 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 CCDC134Q9H6E4 229 aa16.26■□□□□ 0.19
CNOT9-208ENST00000542068 WDR64B1ANS9 1081 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 LIG4P49917 911 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 CCNHP51946 323 aaPredicted RBP16.25■□□□□ 0.19
CNOT9-208ENST00000542068 IL9RQ01113 521 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 DLK2Q6UY11 383 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
CNOT9-208ENST00000542068 WHRNQ9P202 907 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
CNOT9-208ENST00000542068 CYP1A2P05177 515 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 CA4P22748 312 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 PCK1P35558 622 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 PSMC5P62195 406 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
CNOT9-208ENST00000542068 STRN3Q13033 797 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 PGM5Q15124 567 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
CNOT9-208ENST00000542068 ACAD10Q6JQN1 1059 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 DPH6Q7L8W6 267 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 TMEM109Q9BVC6 243 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 PICK1Q9NRD5 415 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 FSCN2O14926 492 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 NR3C2P08235 984 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 CCND1P24385 295 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 MAGEA4P43358 317 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 TAS2R40P59535 323 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 OSTNP61366 133 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 CYP1B1Q16678 543 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 GALNTL6Q49A17 601 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 KRT39Q6A163 491 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 ANKS1BQ7Z6G8 1248 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 ANKLE1Q8NAG6 615 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 KIFAP3Q92845 792 aa16.25■□□□□ 0.19
CNOT9-208ENST00000542068 PDCD2LQ9BRP1 358 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms