RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TCEAL8Q8IYN2 117 aa13□□□□□ -0.33
COPA-205ENST00000541366 ZSCAN18Q8TBC5 510 aaPredicted RBP13□□□□□ -0.33
COPA-205ENST00000541366 SH2B1Q9NRF2 756 aaPredicted RBP13□□□□□ -0.33
COPA-205ENST00000541366 WNT7AO00755 349 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 ZNF197O14709 1029 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 CDC45O75419 566 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 BAG4O95429 457 aaKnown RBP12.99□□□□□ -0.33
COPA-205ENST00000541366 ATF2P15336 505 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
COPA-205ENST00000541366 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 STPG1Q5TH74 334 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 ZBTB8OSQ8IWT0 167 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 SLFN12Q8IYM2 578 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 TMEM130Q8N3G9 435 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 CEP120Q8N960 986 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 DDX1Q92499 740 aaKnown RBP12.99□□□□□ -0.33
COPA-205ENST00000541366 ADPGKQ9BRR6 497 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 KIFC3Q9BVG8 833 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 CCDC113Q9H0I3 377 aa12.99□□□□□ -0.33
COPA-205ENST00000541366 ANKRD11Q6UB99 2663 aaPredicted RBP12.98□□□□□ -0.33
COPA-205ENST00000541366 ACKR2O00590 384 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 EXTL3O43909 919 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 MICAL2O94851 1124 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 KCNK5O95279 499 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 PAPSS2O95340 614 aaPredicted RBP12.98□□□□□ -0.33
COPA-205ENST00000541366 PROS1P07225 676 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 ATP2B1P20020 1258 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 CNR2P34972 360 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 KPNA1P52294 538 aaPredicted RBP12.98□□□□□ -0.33
COPA-205ENST00000541366 LIMK1P53667 647 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 TWF1Q12792 350 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 NR5A1Q13285 461 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 STXBP5Q5T5C0 1151 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 NT5DC1Q5TFE4 455 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 PKN3Q6P5Z2 889 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 KBTBD6Q86V97 674 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 C12orf50Q8NA57 414 aaPredicted RBP12.98□□□□□ -0.33
COPA-205ENST00000541366 SHKBP1Q8TBC3 707 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 CSGALNACT1Q8TDX6 532 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 LRRC3BQ96PB8 259 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 SLITRK6Q9H5Y7 841 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
COPA-205ENST00000541366 TRPV4Q9HBA0 871 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 POLR3BQ9NW08 1133 aaPredicted RBP12.98□□□□□ -0.33
COPA-205ENST00000541366 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 PCDHA12Q9UN75 941 aa12.98□□□□□ -0.33
COPA-205ENST00000541366 AKAP13Q12802 2813 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 GIPC1O14908 333 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 ZNF806P0C7X5 589 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 SPATA31C1P0DKV0 1188 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 PSMA5P28066 241 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 TXKP42681 527 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 OSTNP61366 133 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 LRRC32Q14392 662 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 PON2Q15165 354 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 CALCRLQ16602 461 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 MAPK6Q16659 721 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 RUFY3Q7L099 469 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 TCEAL3Q969E4 200 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 ZNF512Q96ME7 567 aaPredicted RBP12.97□□□□□ -0.33
COPA-205ENST00000541366 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
COPA-205ENST00000541366 GTSE1Q9NYZ3 720 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
COPA-205ENST00000541366 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
COPA-205ENST00000541366 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 SPECC1L-ADORA2AF8WAN1 911 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 PODXLO00592 558 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 SPINK2P20155 84 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 CTHP32929 405 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 EPHA5P54756 1037 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 MRPL58Q14197 206 aaKnown RBP12.96□□□□□ -0.33
COPA-205ENST00000541366 CTXN3Q4LDR2 81 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 PSAPL1Q6NUJ1 521 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 WDR5BQ86VZ2 330 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 YAF2Q8IY57 180 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
COPA-205ENST00000541366 UROC1Q96N76 676 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.33
COPA-205ENST00000541366 C2orf40Q9H1Z8 148 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 ASAH2Q9NR71 780 aa12.96□□□□□ -0.33
COPA-205ENST00000541366 PKD1L2Q7Z442 2459 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 EML5Q05BV3 1969 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 A0A1W2PRU2 124 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 HAX1O00165 279 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 CHADO15335 359 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 FOXD2O60548 495 aaPredicted RBP12.95□□□□□ -0.34
COPA-205ENST00000541366 MED24O75448 989 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 EPN2O95208 641 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 VNN2O95498 520 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 TOP3BO95985 862 aaKnown RBP12.95□□□□□ -0.34
COPA-205ENST00000541366 RAP1GAPP47736 663 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms