RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NXPE4Q6UWF7 544 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM173Q86WV6 379 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 CELF5Q8N6W0 485 aaKnown RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 RNF169Q8NCN4 708 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 HDAC7Q8WUI4 952 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 CLDN23Q96B33 292 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 SDF4Q9BRK5 362 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 BHLHE41Q9C0J9 482 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 ABCB6Q9NP58 842 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 ZFP64Q9NPA5 681 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 MAN1C1Q9NR34 630 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 DACT1Q9NYF0 836 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 RAB23Q9ULC3 237 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 ZFP37Q9Y6Q3 630 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 DSPP15924 2871 aaKnown RBP5.22□□□□□ -1.57
SNHG1-214ENST00000540865 IGF2RP11717 2491 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 SALL3Q9BXA9 1300 aa5.22□□□□□ -1.57
SNHG1-214ENST00000540865 MYH7BA7E2Y1 1941 aa5.21□□□□□ -1.57
SNHG1-214ENST00000540865 KIAA1671Q9BY89 1806 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 A0A096LPE4 126 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 A0A0A0MRY4 1105 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 A0A1W2PPZ6 126 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 INPPL1O15357 1258 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 NCAM2O15394 837 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ZC3H11AO75152 810 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 DEAF1O75398 565 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 C22orf31O95567 290 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 VTNP04004 478 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 EIF4BP23588 611 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 RPS9P46781 194 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 GPC5P78333 572 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 SNW1Q13573 536 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 UBXN2BQ14CS0 331 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 MLF2Q15773 248 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 CSRP2Q16527 193 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 IMMTQ16891 758 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 SLC44A4Q53GD3 710 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ZBTB41Q5SVQ8 909 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ABHD15Q6UXT9 468 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 VN1R5Q7Z5H4 357 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 GIPC2Q8TF65 315 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 BCL7CQ8WUZ0 217 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 BSNDQ8WZ55 320 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 SMG7Q92540 1137 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF707Q96C28 371 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 NELL2Q99435 816 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 VN1R3Q9BXE9 311 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ADAM19Q9H013 955 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ADAMTS10Q9H324 1103 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 NRDE2Q9H7Z3 1164 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 PSTPIP2Q9H939 334 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 LTB4R2Q9NPC1 389 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 PRMT8Q9NR22 394 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 CHST12Q9NRB3 414 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 MRPL17Q9NRX2 175 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 KCNH7Q9NS40 1196 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 PARP2Q9UGN5 583 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 SOX13Q9UN79 622 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 SSX2IPQ9Y2D8 614 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 PPME1Q9Y570 386 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 NUMBLQ9Y6R0 609 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 ASH1LQ9NR48 2969 aaKnown RBP5.21□□□□□ -1.58
SNHG1-214ENST00000540865 MAST4O15021 2626 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 BPTFQ12830 3046 aa5.21□□□□□ -1.58
SNHG1-214ENST00000540865 WDFY3Q8IZQ1 3526 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 GCN1Q92616 2671 aaKnown RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 TMEM238LA0A1B0GVL6 79 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SPDYE3A6NKU9 549 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MAGEB2O15479 319 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 TEX28O15482 410 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PRPF40AO75400 957 aaKnown RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 GLUD1P00367 558 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SOD2P04179 222 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 DARSP14868 501 aaKnown RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 TMOD1P28289 359 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SMARCA1P28370 1054 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SLC11A1P49279 550 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 LIMK1P53667 647 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 NLRP11P59045 1033 aaKnown RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PFKPQ01813 784 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 RNASELQ05823 741 aaKnown RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 TROAPQ12815 778 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 ITGB3BPQ13352 177 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PPP2R5DQ14738 602 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SETDB1Q15047 1291 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 NOMO2Q5JPE7 1267 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 NKAPLQ5M9Q1 402 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 ARTNQ5T4W7 220 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 IL31Q6EBC2 164 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 GLB1LQ6UWU2 654 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PRR23CQ6ZRP0 262 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 METTL13Q8N6R0 699 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 GALNT11Q8NCW6 608 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 FBF1Q8TES7 1133 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SLC7A3Q8WY07 619 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms