RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 POU5F1BQ06416 359 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 UAP1Q16222 522 aaPredicted RBP14.71□□□□□ -0.05
RTN3-210ENST00000540798 SEL1L2Q5TEA6 688 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 MPZL3Q6UWV2 235 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 CPA5Q8WXQ8 436 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 EMID1Q96A84 441 aaPredicted RBP14.71□□□□□ -0.05
RTN3-210ENST00000540798 ERP44Q9BS26 406 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 TXLNGYQ9BZA5 131 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 GOLGA6CA6NDK9 693 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 GLTPD2A6NH11 291 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 H0YGN5 161 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 SPOPO43791 374 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 GOLGA6DP0CG33 693 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 RRM1P23921 792 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 GNA15P30679 374 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 SLC1A1P43005 524 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 RWDD2BP57060 319 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 TFDP1Q14186 410 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 TMEM270Q6UE05 265 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 ZBTB33Q86T24 672 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 SLC13A5Q86YT5 568 aaPredicted RBP14.71□□□□□ -0.05
RTN3-210ENST00000540798 ARL8AQ96BM9 186 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 KATNBL1Q9H079 304 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 ZDHHC18Q9NUE0 388 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 GOLGA6AQ9NYA3 693 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 NFS1Q9Y697 457 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 CYP2C8P10632 490 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 NSFP46459 744 aaKnown RBP14.7□□□□□ -0.06
RTN3-210ENST00000540798 SPDYCQ5MJ68 293 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 EMC10Q5UCC4 262 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
RTN3-210ENST00000540798 TRAPPC12Q8WVT3 735 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 MS4A4AQ96JQ5 239 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 TRIM51Q9BSJ1 452 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 ANAPC7Q9UJX3 599 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 B4GALT4O60513 344 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 HSD17B3P37058 310 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 HLTFQ14527 1009 aaKnown RBP eCLIP14.7□□□□□ -0.06
RTN3-210ENST00000540798 FAM187BQ17R55 369 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 ZNF484Q5JVG2 852 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 TTC27Q6P3X3 843 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
RTN3-210ENST00000540798 JAMLQ86YT9 394 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 GPRC5AQ8NFJ5 357 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 FAM76AQ8TAV0 307 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 LRRC45Q96CN5 670 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 VTA1Q9NP79 307 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 ERAP1Q9NZ08 941 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 FSCN2O14926 492 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 HARSP12081 509 aaKnown RBP14.7□□□□□ -0.06
RTN3-210ENST00000540798 MAPK4P31152 587 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
RTN3-210ENST00000540798 LAMC2Q13753 1193 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 DUOXA2Q1HG44 320 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 ATF7IP2Q5U623 682 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 PLEKHA7Q6IQ23 1121 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 EFCAB12Q6NXP0 572 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 MTMR12Q9C0I1 747 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 RNPEPQ9H4A4 650 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 TNFSF13BQ9Y275 285 aa14.7□□□□□ -0.06
RTN3-210ENST00000540798 ZNF236Q9UL36 1845 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 FLT3P36888 993 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 TMC3Q7Z5M5 1100 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 ADAT2Q7Z6V5 191 aaKnown RBP14.69□□□□□ -0.06
RTN3-210ENST00000540798 C18orf8Q96DM3 657 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 RUNDC3BQ96NL0 473 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 RUFY1Q96T51 708 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 MORF4L1Q9UBU8 362 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 TCRBV7S2A1N4TA0A589 114 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 ACTN2P35609 894 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 SGSM1Q2NKQ1 1148 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 GOLGA6L1Q8N7Z2 621 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 SLCO2A1Q92959 643 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 SLC10A4Q96EP9 437 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 TRIM7Q9C029 511 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 XYLT2Q9H1B5 865 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 MINDY3Q9H8M7 445 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 IFT122Q9HBG6 1241 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 RSPH14Q9UHP6 348 aa14.69□□□□□ -0.06
RTN3-210ENST00000540798 PPFIA2O75334 1257 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 PROSCO94903 275 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 KRT14P02533 472 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 LGALS2P05162 132 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 GJB1P08034 283 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 IQCF3P0C7M6 154 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 MYL6P60660 151 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 MAMLD1Q13495 774 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 PPTC7Q8NI37 304 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 TCHPQ9BT92 498 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 IMPG2Q9BZV3 1241 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 NIF3L1Q9GZT8 377 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 LRRC19Q9H756 370 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 PLAAQ9Y263 795 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 COL1A2P08123 1366 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 B4GALT5O43286 388 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 RARAP10276 462 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 FNTAP49354 379 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 CLCN3P51790 818 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 CCNA1P78396 465 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms