RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 OLFML3Q9NRN5 406 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 GDE1Q9NZC3 331 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-208ENST00000540683 CDH7Q9ULB5 785 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 POLIQ9UNA4 740 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 C2CD2Q9Y426 696 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 CLIC4Q9Y696 253 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 PLXNA3P51805 1871 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 TECTAO75443 2155 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 MUC6Q6W4X9 2439 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 A0A0B4J269 797 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 F8W810 466 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 RFPL2O75678 378 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 MICAL2O94851 1124 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 SPATA31D3P0C874 917 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 CXCL8P10145 99 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 ODC1P11926 461 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 LAMP2P13473 410 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 PTPN2P17706 415 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 RPL17P18621 184 aaKnown RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 TYMPP19971 482 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 TKTP29401 623 aaKnown RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 PNPLA4P41247 253 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 SMARCB1Q12824 385 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 PABPC1LQ4VXU2 614 aaKnown RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 ASTLQ6HA08 431 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 SPATA31D4Q6ZUB0 917 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 GET4Q7L5D6 327 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 TCEAL8Q8IYN2 117 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 CEP120Q8N960 986 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 RABGGTAQ92696 567 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 DDX12PQ92771 950 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 GPR88Q9GZN0 384 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 TNMDQ9H2S6 317 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 HSFX1Q9UBD0 423 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
CDCA3-208ENST00000540683 MTMR6Q9Y217 621 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 USP20Q9Y2K6 914 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
CDCA3-208ENST00000540683 C2orf16Q68DN1 1984 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 NPHP3-ACAD11A0A0J9YXS1 232 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 M0QZQ0 153 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 SPTLC2O15270 562 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 CUTAO60888 179 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ABLIM3O94929 683 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 OAZ2O95190 189 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ADRB2P07550 413 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 CPB1P15086 417 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 AVPR2P30518 371 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 CEBPZQ03701 1054 aaKnown RBP11.27□□□□□ -0.61
CDCA3-208ENST00000540683 MYBPC2Q14324 1141 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 SURF1Q15526 300 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 E2F7Q96AV8 911 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 EPSTI1Q96J88 318 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ZNF512Q96ME7 567 aaPredicted RBP11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ZNF560Q96MR9 790 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ZMAT2Q96NC0 199 aaKnown RBP11.27□□□□□ -0.61
CDCA3-208ENST00000540683 GOLGA2P5Q9HBQ8 144 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 AFF4Q9UHB7 1163 aaKnown RBP11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ZMYM5Q9UJ78 669 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
CDCA3-208ENST00000540683 ASB3Q9Y575 518 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 STYXL1Q9Y6J8 313 aa11.27□□□□□ -0.61
CDCA3-208ENST00000540683 PDCD11Q14690 1871 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 PIEZO1Q92508 2521 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CCL16O15467 120 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 GCNT3O95395 438 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ASGR2P07307 311 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 IDEP14735 1019 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 GARTP22102 1010 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ALDH1A3P47895 512 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 SNRPFP62306 86 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ROR1Q01973 937 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 MRPL58Q14197 206 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ENOX2Q16206 610 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 SV2CQ496J9 727 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 RSPO2Q6UXX9 243 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 DYMQ7RTS9 669 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 GRASPQ7Z6J2 395 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ITIH5Q86UX2 942 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 THEM5Q8N1Q8 247 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms