RNA–Protein interactions for RNA: ENST00000540232.5

TAF1D-221, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-221	ENST00000540232		Q8NA96	180 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	IL17RD	Q8NFM7	739 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	TBC1D15	Q8TC07	691 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	RAB24	Q969Q5	203 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	COA7	Q96BR5	231 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	RIOX1	Q9H6W3	641 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	UNKL	Q9H9P5	680 aa	Known RBP	4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	ALG13	Q9NP73	1137 aa	Known RBP	4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	TBCCD1	Q9NVR7	557 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	CALCOCO1	Q9P1Z2	691 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	ZNHIT2	Q9UHR6	403 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	PCDHA13	Q9Y5I0	950 aa		4.89	□□□□□ -1.63
TAF1D-221	ENST00000540232	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	CCDC154	A6NI56	674 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	ERN1	O75460	977 aa	Known RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	MTHFD1	P11586	935 aa	Known RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	FCER1A	P12319	257 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	FBL	P22087	321 aa	Known RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	CLK3	P49761	638 aa	Known RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	TLE1	Q04724	770 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	C3orf36	Q3SXR2	165 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	PPP4R3A	Q6IN85	833 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	SLC44A3	Q8N4M1	653 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232		Q96MF0	132 aa		4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	TES	Q9UGI8	421 aa	Known RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	MTO1	Q9Y2Z2	717 aa	Known RBP	4.88	□□□□□ -1.63
TAF1D-221	ENST00000540232	KIAA0355	O15063	1070 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	ZFPL1	O95159	310 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	SBK3	P0C264	359 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	ADK	P55263	362 aa	Known RBP	4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	KIF23	Q02241	960 aa	Predicted RBP	4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	IL10RA	Q13651	578 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	FAM50A	Q14320	339 aa	Known RBP	4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	ERCC6L	Q2NKX8	1250 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	EFCAB2	Q5VUJ9	269 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232		Q6ZNX1	250 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	COLGALT2	Q8IYK4	626 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	LNX2	Q8N448	690 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	NSUN6	Q8TEA1	469 aa	Known RBP	4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	DMRTA2	Q96SC8	542 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	PRDM13	Q9H4Q3	707 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	JKAMP	Q9P055	326 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	SERPINB13	Q9UIV8	391 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	SPEF1	Q9Y4P9	236 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	PCDHB1	Q9Y5F3	818 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	CFAP20	Q9Y6A4	193 aa	Known RBP	4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232	TNKS	O95271	1327 aa		4.87	□□□□□ -1.63
TAF1D-221	ENST00000540232		A0A1W2PS29	197 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	SLC43A1	O75387	559 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	RPLP2	P05387	115 aa	Known RBP	4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	CD1A	P06126	327 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	CXCR5	P32302	372 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	ZNF280A	P59817	542 aa	Predicted RBP	4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	PTPN21	Q16825	1174 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	GEN1	Q17RS7	908 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	STRIP1	Q5VSL9	837 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	SP5	Q6BEB4	398 aa	Predicted RBP	4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	ZNF365	Q70YC5	407 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	BBC3	Q96PG8	261 aa	Predicted RBP	4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	TLR10	Q9BXR5	811 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	ASPSCR1	Q9BZE9	553 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	PCDH12	Q9NPG4	1184 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	CASS4	Q9NQ75	786 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	COL4A3BP	Q9Y5P4	624 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	WASHC2C	Q9Y4E1	1318 aa		4.86	□□□□□ -1.63
TAF1D-221	ENST00000540232	AGFG2	O95081	481 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.85	□□□□□ -1.63	2e-7	■■■□□ 18.7
TAF1D-221	ENST00000540232	EVA1C	P58658	441 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	ZNF169	Q14929	603 aa	Predicted RBP	4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	ODF1	Q14990	250 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	FLYWCH1	Q4VC44	716 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	UTP14C	Q5TAP6	766 aa	Known RBP	4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	DPY19L2P1	Q6NXN4	242 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	GADL1	Q6ZQY3	521 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	PNMA8A	Q86V59	439 aa	Predicted RBP	4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	ADGRG3	Q86Y34	549 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	SIMC1	Q8NDZ2	872 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	SSH3	Q8TE77	659 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	KAT5	Q92993	513 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	PTCD3	Q96EY7	689 aa	Known RBP	4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	CLPTM1L	Q96KA5	538 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	KLHL32	Q96NJ5	620 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	AIFM2	Q9BRQ8	373 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	PACSIN1	Q9BY11	444 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	KCTD5	Q9NXV2	234 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	CTTNBP2NL	Q9P2B4	639 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	NEU2	Q9Y3R4	380 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	INSL6	Q9Y581	213 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	SALL3	Q9BXA9	1300 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	COL11A2	P13942	1736 aa	Predicted RBP	4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	KAT6A	Q92794	2004 aa		4.85	□□□□□ -1.63
TAF1D-221	ENST00000540232	TRGV11	A0A075B6L2	103 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	PRAMEF33	A0A0G2JMD5	474 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	PRAMEF10	O60809	474 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	ANXA1	P04083	346 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	KCNA2	P16389	499 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	FXR1	P51114	621 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	DSC2	Q02487	901 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	UAP1L1	Q3KQV9	507 aa		4.84	□□□□□ -1.63
TAF1D-221	ENST00000540232	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms