RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MACROD2A1Z1Q3 448 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 MOXD2PA6NHM9 499 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 URI1O94763 535 aaPredicted RBP18.1■□□□□ 0.49
COPS3-212ENST00000539941 INHAP05111 366 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 CAPN2P17655 700 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 JADE1Q6IE81 842 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 ZNF677Q86XU0 584 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 TMEM40Q8WWA1 233 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 NIF3L1Q9GZT8 377 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 HMX1Q9NP08 348 aaPredicted RBP18.1■□□□□ 0.49
COPS3-212ENST00000539941 GEMIN8Q9NWZ8 242 aaKnown RBP18.1■□□□□ 0.49
COPS3-212ENST00000539941 CNTN6Q9UQ52 1028 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 NUB1Q9Y5A7 615 aa18.1■□□□□ 0.49
COPS3-212ENST00000539941 A0A0A6YYK5 440 aaPredicted RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 MEFVO15553 781 aaPredicted RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 SGPL1O95470 568 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 CST3P01034 146 aaPredicted RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 NFICP08651 508 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 KRT5P13647 590 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 CYP11B1P15538 503 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 ACO1P21399 889 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 GRK4P32298 578 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 YARSP54577 528 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 MYL6P60660 151 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 TMEM132DQ14C87 1099 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 IFI16Q16666 785 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 SPOPLQ6IQ16 392 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 TSPAN18Q96SJ8 248 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 FEZ2Q9UHY8 353 aaPredicted RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 PIN4Q9Y237 131 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 CDY2AQ9Y6F7 541 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 ATP8B1O43520 1251 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 GZMAP12544 262 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 ATICP31939 592 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 CDR2Q01850 454 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 GPS2Q13227 327 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 ZNF699Q32M78 642 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 NOP9Q86U38 636 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 SLC47A2Q86VL8 602 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 RPUSD2Q8IZ73 545 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 PLCD3Q8N3E9 789 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 SLC20A1Q8WUM9 679 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 TRIM6Q9C030 488 aaPredicted RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 XYLT2Q9H1B5 865 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 VRTNQ9H8Y1 702 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 CWC15Q9P013 229 aaKnown RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 PCDHB2Q9Y5E7 798 aa18.09■□□□□ 0.49
COPS3-212ENST00000539941 V9GYY5 206 aaPredicted RBP18.09■□□□□ 0.49
COPS3-212ENST00000539941 GRIN2DO15399 1336 aa18.08■□□□□ 0.49
COPS3-212ENST00000539941 TNNT3P45378 269 aaPredicted RBP18.08■□□□□ 0.48
COPS3-212ENST00000539941 ACLYP53396 1101 aa18.08■□□□□ 0.48
COPS3-212ENST00000539941 YWHAEP62258 255 aaKnown RBP18.08■□□□□ 0.48
COPS3-212ENST00000539941 UBR7Q8N806 425 aa18.08■□□□□ 0.48
COPS3-212ENST00000539941 C1orf127Q8N9H9 656 aa18.08■□□□□ 0.48
COPS3-212ENST00000539941 SNX27Q96L92 541 aa18.08■□□□□ 0.48
COPS3-212ENST00000539941 PACSIN1Q9BY11 444 aa18.08■□□□□ 0.48
COPS3-212ENST00000539941 EIF2AQ9BY44 585 aaKnown RBP18.08■□□□□ 0.48
COPS3-212ENST00000539941 SENP6Q9GZR1 1112 aaPredicted RBP18.08■□□□□ 0.48
COPS3-212ENST00000539941 CLSTN1O94985 981 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 SLU7O95391 586 aaKnown RBP18.07■□□□□ 0.48
COPS3-212ENST00000539941 MOCS3O95396 460 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 STAU1O95793 577 aaKnown RBP18.07■□□□□ 0.48
COPS3-212ENST00000539941 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
COPS3-212ENST00000539941 TMEM253P0C7T8 217 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 CHRNB2P17787 502 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 PTGISQ16647 500 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 FAM228AQ86W67 206 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 DDX1Q92499 740 aaKnown RBP18.07■□□□□ 0.48
COPS3-212ENST00000539941 ISCUQ9H1K1 167 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 FAM124BQ9H5Z6 455 aaPredicted RBP18.07■□□□□ 0.48
COPS3-212ENST00000539941 SEPT11Q9NVA2 429 aaKnown RBP18.07■□□□□ 0.48
COPS3-212ENST00000539941 SIX4Q9UIU6 781 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 JRKLQ9Y4A0 524 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 PCDHB4Q9Y5E5 795 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 MRFAP1Q9Y605 127 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 BRCA2P51587 3418 aa18.07■□□□□ 0.48
COPS3-212ENST00000539941 ANKRD62A6NC57 917 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 GALCP54803 685 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 FMO1Q01740 532 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 MGAT3Q09327 533 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 PTK7Q13308 1070 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 LHX8Q68G74 356 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CXorf38Q8TB03 319 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CTNNBL1Q8WYA6 563 aaPredicted RBP18.06■□□□□ 0.48
COPS3-212ENST00000539941 ELMO3Q96BJ8 720 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 ZNF333Q96JL9 665 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CALR3Q96L12 384 aaKnown RBP18.06■□□□□ 0.48
COPS3-212ENST00000539941 GLT1D1Q96MS3 346 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 RASSF4Q9H2L5 321 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CHST12Q9NRB3 414 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 SNTG2Q9NY99 539 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 SALL4Q9UJQ4 1053 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 NOC2LQ9Y3T9 749 aaKnown RBP18.06■□□□□ 0.48
COPS3-212ENST00000539941 PCDHGC5Q9Y5F6 944 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CAPN6Q9Y6Q1 641 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 NCANO14594 1321 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 UMODL1Q5DID0 1318 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 FRMPD3Q5JV73 1810 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms