RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PSRC1Q6PGN9 363 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 IRF2BP2Q7Z5L9 587 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 FRMD5Q7Z6J6 570 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 VPS36Q86VN1 386 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 TEX9Q8N6V9 391 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 SLC44A5Q8NCS7 719 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 REPS2Q8NFH8 660 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 TBC1D5Q92609 795 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 RAD54LQ92698 747 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 TIFAQ96CG3 184 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 IFT74Q96LB3 600 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 DMRTB1Q96MA1 342 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 TEX13BQ9BXU2 312 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 ZNF287Q9HBT7 754 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 STARD7Q9NQZ5 370 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 BLOC1S4Q9NUP1 217 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 NOP53Q9NZM5 478 aaKnown RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 CTNNAL1Q9UBT7 734 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 ZNF214Q9UL59 606 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 CORO1CQ9ULV4 474 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 RPL26L1Q9UNX3 145 aaKnown RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 MYO9BQ13459 2157 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 DNAJC25-GNG10A0A024R161 153 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 hCG_1642624A0A1W2PR95 340 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GTPBP10A4D1E9 387 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MYMKA6NI61 221 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 O00370 1275 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 KRIT1O00522 736 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 PODXLO00592 558 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 KCNK3O14649 394 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 BACH1O14867 736 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 BUB1O43683 1085 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 ATP5HO75947 161 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 LUC7L3O95232 432 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GGPS1O95749 300 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 PGK1P00558 417 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 NR3C2P08235 984 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 AKR1B1P15121 316 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GBP2P32456 591 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MAPK8P45983 427 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 CDK7P50613 346 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 PDE6CP51160 858 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 EPHA4P54764 986 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 HADHBP55084 474 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MAGOHP61326 146 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 DHX9Q08211 1270 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 ADCY2Q08462 1091 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 RAB30Q15771 203 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 INF2Q27J81 1249 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 TDRD12Q587J7 1177 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 DUPD1Q68J44 220 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 TRPM8Q7Z2W7 1104 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 CEP57Q86XR8 500 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 NT5DC4Q86YG4 428 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 TMEM199Q8N511 208 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MORC4Q8TE76 937 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 LRRC15Q8TF66 581 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 SDR42E1Q8WUS8 393 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 LARP4BQ92615 738 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MAGOHBQ96A72 148 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 HES6Q96HZ4 224 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GLT1D1Q96MS3 346 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GAS2L1Q99501 681 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 ERP44Q9BS26 406 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 UPF3AQ9H1J1 476 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 TSPAN10Q9H1Z9 355 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 GANQ9H2C0 597 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MTIF3Q9H2K0 278 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 PABPC3Q9H361 631 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 CENPHQ9H3R5 247 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 ABHD16BQ9H3Z7 469 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 RABEP2Q9H5N1 569 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 SPC25Q9HBM1 224 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 METTL14Q9HCE5 456 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 SLC39A2Q9NP94 309 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 METTL5Q9NRN9 209 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 HAUS2Q9NVX0 235 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 SAMD15Q9P1V8 674 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 CNOT8Q9UFF9 292 aaKnown RBP8.2□□□□□ -1.1
CCDC60-204ENST00000539847 FBXO40Q9UH90 709 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 MAD2L2Q9UI95 211 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 C15orf41Q9Y2V0 281 aa8.2□□□□□ -1.1
CCDC60-204ENST00000539847 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 A0A087X0T9 212 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 ESYT3A0FGR9 886 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 PP2D1A8MPX8 630 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CETN3O15182 167 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CEP104O60308 925 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 FZD6O60353 706 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CABYRO75952 493 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 FTCDO95954 541 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 ADH1CP00326 375 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 H2AFZP0C0S5 128 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 FAM228BP0C875 321 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 PDHBP11177 359 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms