RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CDC42EP1Q00587 391 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 NT5DC3Q86UY8 548 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 RHOT2Q8IXI1 618 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 ZNF653Q96CK0 615 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 RPGRIP1Q96KN7 1286 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 ACAP3Q96P50 834 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 XYLT2Q9H1B5 865 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 SIX4Q9UIU6 781 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 POLIQ9UNA4 740 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 CNTN6Q9UQ52 1028 aa24.03■■□□□ 1.44
HOMER3-204ENST00000539827 KCNK3O14649 394 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 CFHP08603 1231 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 DARSP14868 501 aaKnown RBP24.02■■□□□ 1.44
HOMER3-204ENST00000539827 GNA15P30679 374 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 HOXA11P31270 313 aaPredicted RBP24.02■■□□□ 1.44
HOMER3-204ENST00000539827 PAFAH1B1P43034 410 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 NOGQ13253 232 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 KYAT1Q16773 422 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 GNASQ5JWF2 1037 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 ZNF677Q86XU0 584 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 C7orf31Q8N865 590 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 C1orf127Q8N9H9 656 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 AMFRQ9UKV5 643 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 MROH7Q68CQ1 1323 aa24.02■■□□□ 1.44
HOMER3-204ENST00000539827 PGK1P00558 417 aa24.02■■□□□ 1.43
HOMER3-204ENST00000539827 MSANTD4Q8NCY6 345 aa24.02■■□□□ 1.43
HOMER3-204ENST00000539827 PNKPQ96T60 521 aa24.02■■□□□ 1.43
HOMER3-204ENST00000539827 ASB7Q9H672 318 aa24.02■■□□□ 1.43
HOMER3-204ENST00000539827 ABCB6Q9NP58 842 aa24.02■■□□□ 1.43
HOMER3-204ENST00000539827 NXF1Q9UBU9 619 aaKnown RBP24.02■■□□□ 1.43
HOMER3-204ENST00000539827 WEE2P0C1S8 567 aa24.01■■□□□ 1.43
HOMER3-204ENST00000539827 UNGP13051 313 aaPredicted RBP24.01■■□□□ 1.43
HOMER3-204ENST00000539827 GUCY2FP51841 1108 aa24.01■■□□□ 1.43
HOMER3-204ENST00000539827 GJA9P57773 515 aa24.01■■□□□ 1.43
HOMER3-204ENST00000539827 RNASE9P60153 205 aaKnown RBP24.01■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF572Q7Z3I7 529 aaPredicted RBP24.01■■□□□ 1.43
HOMER3-204ENST00000539827 CPA5Q8WXQ8 436 aa24.01■■□□□ 1.43
HOMER3-204ENST00000539827 CAPNS2Q96L46 248 aa24.01■■□□□ 1.43
HOMER3-204ENST00000539827 EIF2AQ9BY44 585 aaKnown RBP24.01■■□□□ 1.43
HOMER3-204ENST00000539827 ARGLU1Q9NWB6 273 aaPredicted RBP24.01■■□□□ 1.43
HOMER3-204ENST00000539827 TMEM110-MUSTN1A8MSY1 372 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 THAP12O43422 761 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 ITGB3P05106 788 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 GRM5P41594 1212 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 POU5F1Q01860 360 aaKnown RBP24■■□□□ 1.43
HOMER3-204ENST00000539827 DCAF4L1Q3SXM0 396 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 PASD1Q8IV76 773 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 SPATA4Q8NEY3 305 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 CYFIP2Q96F07 1278 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 CISHQ9NSE2 258 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 CYP1A2P05177 515 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF132P52740 706 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 TMEM132DQ14C87 1099 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 TCEAL1Q15170 157 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 DEFB115Q30KQ5 88 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 CFAP221Q4G0U5 840 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF394Q53GI3 561 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 NAA35Q5VZE5 725 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 TMEM40Q8WWA1 233 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 SNTG2Q9NY99 539 aa24■■□□□ 1.43
HOMER3-204ENST00000539827 EIF4BP23588 611 aaKnown RBP23.99■■□□□ 1.43
HOMER3-204ENST00000539827 ASPAP45381 313 aa23.99■■□□□ 1.43
HOMER3-204ENST00000539827 HADHBP55084 474 aaKnown RBP23.99■■□□□ 1.43
HOMER3-204ENST00000539827 CACNB2Q08289 660 aaPredicted RBP23.99■■□□□ 1.43
HOMER3-204ENST00000539827 CXCL17Q6UXB2 119 aa23.99■■□□□ 1.43
HOMER3-204ENST00000539827 MTG1Q9BT17 334 aaPredicted RBP23.99■■□□□ 1.43
HOMER3-204ENST00000539827 NUP85Q9BW27 656 aa23.99■■□□□ 1.43
HOMER3-204ENST00000539827 CCDC94Q9BW85 323 aaPredicted RBP23.99■■□□□ 1.43
HOMER3-204ENST00000539827 TOMM70O94826 608 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 CYP1A1P04798 512 aaPredicted RBP23.98■■□□□ 1.43
HOMER3-204ENST00000539827 GNAT1P11488 350 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 RAP1GAPP47736 663 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 SNX17Q15036 470 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 SLC27A1Q6PCB7 646 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 PHLDB2Q86SQ0 1253 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF784Q8NCA9 323 aaPredicted RBP23.98■■□□□ 1.43
HOMER3-204ENST00000539827 PBKQ96KB5 322 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 CXCL16Q9H2A7 254 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 RNF14Q9UBS8 474 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 CNOT8Q9UFF9 292 aaKnown RBP23.98■■□□□ 1.43
HOMER3-204ENST00000539827 GTF3C4Q9UKN8 822 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 KPNA6O60684 536 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 SP3Q02447 781 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF667Q5HYK9 610 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 NOTUMQ6P988 496 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 MCOLN2Q8IZK6 566 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 CXorf38Q8TB03 319 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 KIF12Q96FN5 646 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 HES6Q96HZ4 224 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 BTBD6Q96KE9 485 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 RNF186Q9NXI6 227 aa23.98■■□□□ 1.43
HOMER3-204ENST00000539827 CEP104O60308 925 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 POLR2BP30876 1174 aaKnown RBP23.97■■□□□ 1.43
HOMER3-204ENST00000539827 HOXC8P31273 242 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 MESDQ14696 234 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 NBPF20Q3BBV1 942 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 GLIPR1L2Q4G1C9 344 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 MMGT1Q8N4V1 131 aa23.97■■□□□ 1.43
HOMER3-204ENST00000539827 ZNF564Q8TBZ8 553 aaPredicted RBP23.97■■□□□ 1.43
HOMER3-204ENST00000539827 UPF3AQ9H1J1 476 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms