RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 NELL1Q92832 810 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 C18orf25Q96B23 403 aaPredicted RBP16.36■□□□□ 0.21
USB1-203ENST00000539737 RSPRY1Q96DX4 576 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 AK8Q96MA6 479 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 ZMAT2Q96NC0 199 aaKnown RBP16.36■□□□□ 0.21
USB1-203ENST00000539737 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
USB1-203ENST00000539737 CACNA1GO43497 2377 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 F13A1P00488 732 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
USB1-203ENST00000539737 PFKPQ01813 784 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 IL17AQ16552 155 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 SEZ6Q53EL9 994 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 VITQ6UXI7 678 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 ZNF396Q96N95 335 aaPredicted RBP16.35■□□□□ 0.21
USB1-203ENST00000539737 C2orf40Q9H1Z8 148 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 CDV3Q9UKY7 258 aaKnown RBP16.35■□□□□ 0.21
USB1-203ENST00000539737 MORC2Q9Y6X9 1032 aaPredicted RBP16.35■□□□□ 0.21
USB1-203ENST00000539737 ZMYM2Q9UBW7 1377 aa16.35■□□□□ 0.21
USB1-203ENST00000539737 CNOT1A5YKK6 2376 aaKnown RBP16.34■□□□□ 0.21
USB1-203ENST00000539737 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 ACKR2O00590 384 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 PRRG1O14668 218 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 SLC26A4O43511 780 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 GDF9O60383 454 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 GDI1P31150 447 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 LONP1P36776 959 aaKnown RBP16.34■□□□□ 0.21
USB1-203ENST00000539737 ADCY1Q08828 1119 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 PPP2R5AQ15172 486 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 ATF7IP2Q5U623 682 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 FAM173BQ6P4H8 233 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 ZNF852Q6ZMS4 543 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 Q6ZS52 159 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 OSBPL6Q9BZF3 934 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 CDT1Q9H211 546 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 LMAN1LQ9HAT1 526 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
USB1-203ENST00000539737 CHURC1-FNTBB4DL54 471 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 PODXLO00592 558 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 LRG1P02750 347 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 OR4Q2P0C623 313 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 MYL4P12829 197 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 CYP11B2P19099 503 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 FNTBP49356 437 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
USB1-203ENST00000539737 PTPAQ15257 358 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 CCDC6Q16204 474 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 STXBP5Q5T5C0 1151 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 HEATR6Q6AI08 1181 aaKnown RBP16.33■□□□□ 0.2
USB1-203ENST00000539737 KCTD17Q8N5Z5 321 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 ELSPBP1Q96BH3 223 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 IFT74Q96LB3 600 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 USP28Q96RU2 1077 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 ADPGKQ9BRR6 497 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 CEP72Q9P209 647 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
USB1-203ENST00000539737 INSL5Q9Y5Q6 135 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 BACE2Q9Y5Z0 518 aa16.33■□□□□ 0.2
USB1-203ENST00000539737 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 PP2D1A8MPX8 630 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 TMEM189-UBE2V1I3L0A0 370 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 POU2F2P09086 479 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 PTPN2P17706 415 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 CCNE1P24864 410 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 NAMPTP43490 491 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 NASPP49321 788 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 SPAG1Q07617 926 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 TEAD2Q15562 447 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 UVSSAQ2YD98 709 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 FOXD4L5Q5VV16 416 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 TAS1R3Q7RTX0 852 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 APBB1IPQ7Z5R6 666 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 FOXD4L4Q8WXT5 416 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 ZBTB45Q96K62 511 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 ASB16Q96NS5 453 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 CRISPLD1Q9H336 500 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 ZNF334Q9HCZ1 680 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 DDX19AQ9NUU7 478 aaKnown RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 FBXL5Q9UKA1 691 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 TIMM13Q9Y5L4 95 aaPredicted RBP16.32■□□□□ 0.2
USB1-203ENST00000539737 PIAS3Q9Y6X2 628 aa16.32■□□□□ 0.2
USB1-203ENST00000539737 PDCD11Q14690 1871 aaKnown RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 CHD6Q8TD26 2715 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 ARHGEF37A1IGU5 675 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 HRO43593 1189 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 ABLIM3O94929 683 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 VNN2O95498 520 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 UBA7P41226 1012 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 LMNB2Q03252 620 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms