RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ADGRD2Q7Z7M1 963 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 TMC2Q8TDI7 906 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 B3GALT6Q96L58 329 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 MED15Q96RN5 788 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 RWDD2AQ9UIY3 292 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 NUB1Q9Y5A7 615 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 TRANK1O15050 2925 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 TSC2P49815 1807 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 HIDE1A8MVS5 230 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 C2CD2LO14523 706 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 CXCL14O95715 111 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 TNNC2P02585 160 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 POLR2BP30876 1174 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 CA8P35219 290 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 VAMP7P51809 220 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 NFKBIBQ15653 356 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 DUOXA2Q1HG44 320 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 FAM171A1Q5VUB5 890 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 INTS8Q75QN2 995 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 TRAPPC11Q7Z392 1133 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 CSGALNACT2Q8N6G5 542 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 BORCS6Q96GS4 357 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 CEP63Q96MT8 703 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 SIX4Q9UIU6 781 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 AGAP1Q9UPQ3 857 aa13.73□□□□□ -0.21
TSPAN9-207ENST00000539631 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 SPTLC1O15269 473 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 SLC16A3O15427 465 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 URODP06132 367 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 KRT19P08727 400 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 KRT13P13646 458 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 GLUD2P49448 558 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 LILRA4P59901 499 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 CLDN10P78369 228 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 ELAVL2Q12926 359 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 BFSP1Q12934 665 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 PTPN14Q15678 1187 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 TCEAL5Q5H9L2 206 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 RTP2Q5QGT7 225 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 KIAA0319Q5VV43 1072 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 CEP57Q86XR8 500 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 SUSD3Q96L08 255 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 SRRTQ9BXP5 876 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 CHST7Q9NS84 486 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 STXBP5LQ9Y2K9 1186 aa13.72□□□□□ -0.21
TSPAN9-207ENST00000539631 REV3LO60673 3130 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 PER2O15055 1255 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 TRAPPC3O43617 180 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 LILRB3O75022 631 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 CST3P01034 146 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 C4BPAP04003 597 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 FGFR3P22607 806 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 TAF6P49848 677 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 RBP5P82980 135 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 DSG1Q02413 1049 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 BMS1Q14692 1282 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 STX1AQ16623 288 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 KIAA1841Q6NSI8 718 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 DSTYKQ6XUX3 929 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 C11orf57Q6ZUT1 292 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 RBM23Q86U06 439 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 MRPL43Q8N983 215 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 ZNF560Q96MR9 790 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 TTPALQ9BTX7 342 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 MMRN2Q9H8L6 949 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 MRPL17Q9NRX2 175 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 ANO10Q9NW15 660 aa13.71□□□□□ -0.21
TSPAN9-207ENST00000539631 M0QZQ0 153 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 IKBKBO14920 756 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 PHACTR2O75167 634 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 ERCC5P28715 1186 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms