RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 EFHC1Q5JVL4 640 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 LRRC8EQ6NSJ5 796 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 FBXO33Q7Z6M2 555 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 SAMD3Q8N6K7 520 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CALML6Q8TD86 181 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 FAM161BQ96MY7 647 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 OLFM3Q96PB7 478 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 FRMD8P1Q9BZ68 369 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ROPN1BQ9BZX4 212 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ROPN1Q9HAT0 212 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CASS4Q9NQ75 786 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CDV3Q9UKY7 258 aaKnown RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 MOCS2O96007 188 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 STOX1Q6ZVD7 989 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 GSPT2Q8IYD1 628 aaKnown RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CHP1Q99653 195 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF70Q9UC06 446 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 MYMKA6NI61 221 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ZBBXA8MT70 800 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 RALBP11234 206 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 GALCP54803 685 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 WASHC5Q12768 1159 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 TMED1Q13445 227 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 HIC1Q14526 733 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ATF7IP2Q5U623 682 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 MS4A14Q96JA4 679 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 DIP2BQ9P265 1576 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 C1orf167Q5SNV9 1468 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 TCP11X1B4DZS4 312 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 GOLGA8TH3BQL2 631 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CDH16O75309 829 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CAMTA2O94983 1202 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 MYBP10242 640 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 PNPLA4P41247 253 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CCDC144BQ3MJ40 725 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ELP3Q9H9T3 547 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ARL2BPQ9Y2Y0 163 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 PCDHB7Q9Y5E2 793 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 KRT4P19013 534 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 WDR72Q3MJ13 1102 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 NOTUMQ6P988 496 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 CPA5Q8WXQ8 436 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 TMEM143Q96AN5 459 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 EPN3Q9H201 632 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 OLFML3Q9NRN5 406 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PSMC3IPQ9P2W1 217 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ITM2BQ9Y287 266 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 HNRNPRO43390 633 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PDGFRAP16234 1089 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 CENPCQ03188 943 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PDK1Q15118 436 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 DNAL1Q4LDG9 190 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 THEMIS2Q5TEJ8 643 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 GRAMD4Q6IC98 578 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 EFCAB12Q6NXP0 572 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 TNIP2Q8NFZ5 429 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 SLC30A5Q8TAD4 765 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PRMT1Q99873 361 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 FRMD8Q9BZ67 464 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 TRABDQ9H4I3 376 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 RSAD1Q9HA92 442 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 HACL1Q9UJ83 578 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PTPRMP28827 1452 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 CNTNAP5Q8WYK1 1306 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 DIP2CQ9Y2E4 1556 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 KLHL2O95198 593 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 EMC2Q15006 297 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MAPRE1Q15691 268 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ZC3H12BQ5HYM0 836 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MEI1Q5TIA1 1274 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 C16orf89Q6UX73 402 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MICALL2Q8IY33 904 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PCYOX1LQ8NBM8 494 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 RBBP8NLQ8NC74 664 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 FEZF2Q8TBJ5 459 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 USP13Q92995 863 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 MCEEQ96PE7 176 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 KIDINS220Q9ULH0 1771 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 SUPT3HO75486 399 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 RPS6KA5O75582 802 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 HIST1H2AGP0C0S8 130 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 HIST1H2ADP20671 130 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 RGS4P49798 205 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 VCPP55072 806 aaKnown RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 SREBF2Q12772 1141 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PRR5LQ6MZQ0 368 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 LRRC8BQ6P9F7 803 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 CLMNQ96JQ2 1002 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF668Q96K58 619 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 HIST1H2AHQ96KK5 128 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 HIST1H2AJQ99878 128 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 H2AFJQ9BTM1 129 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 RUBCNLQ9H714 662 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 SELENONQ9NZV5 590 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 NEU2Q9Y3R4 380 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 F5H423 210 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-207ENST00000539563 PRKCEQ02156 737 aa6.8□□□□□ -1.32
LSAMP-207ENST00000539563 NBPF20Q3BBV1 942 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms