RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CTXN3Q4LDR2 81 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 PABPC1LQ4VXU2 614 aaKnown RBP24.16■■□□□ 1.46
SCARB1-206ENST00000539320 TMEM130Q8N3G9 435 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 ZNF461Q8TAF7 563 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 DDX12PQ92771 950 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 USP28Q96RU2 1077 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 HCFC1R1Q9NWW0 138 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 ARHGEF37A1IGU5 675 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 LACTBL1A8MY62 500 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 PRRG1O14668 218 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 ABLIM3O94929 683 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 CFHP08603 1231 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 ZBTB6Q15916 424 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 RRAGBQ5VZM2 374 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 DYMQ7RTS9 669 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 SFR1Q86XK3 245 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 ITFG1Q8TB96 612 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 FGF13Q92913 245 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 TSPAN18Q96SJ8 248 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 IRF2BPLQ9H1B7 796 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 ST6GALNAC4Q9H4F1 302 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 DNMT3BQ9UBC3 853 aaKnown RBP24.15■■□□□ 1.46
SCARB1-206ENST00000539320 WNT16Q9UBV4 365 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 KCNH3Q9ULD8 1083 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 NOTCH4Q99466 2003 aa24.15■■□□□ 1.46
SCARB1-206ENST00000539320 STX6O43752 255 aa24.14■■□□□ 1.45
SCARB1-206ENST00000539320 LRG1P02750 347 aa24.14■■□□□ 1.45
SCARB1-206ENST00000539320 NPR3P17342 541 aa24.14■■□□□ 1.45
SCARB1-206ENST00000539320 GUCY2FP51841 1108 aa24.14■■□□□ 1.45
SCARB1-206ENST00000539320 ZC2HC1CQ53FD0 456 aaPredicted RBP24.14■■□□□ 1.45
SCARB1-206ENST00000539320 ZSCAN16Q9H4T2 348 aaPredicted RBP24.14■■□□□ 1.45
SCARB1-206ENST00000539320 CPSF3Q9UKF6 684 aaKnown RBP24.14■■□□□ 1.45
SCARB1-206ENST00000539320 M0QZQ0 153 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 ADRB2P07550 413 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 ATF2P15336 505 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 AOC1P19801 751 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 AARSP49588 968 aaKnown RBP eCLIP24.13■■□□□ 1.454e-6■■■■■ 30.6
SCARB1-206ENST00000539320 TPGS2Q68CL5 300 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 MTSS1LQ765P7 747 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 CD302Q8IX05 232 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 NPAS3Q8IXF0 933 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 TCEAL8Q8IYN2 117 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 ST13P5Q8NFI4 369 aaPredicted RBP24.13■■□□□ 1.45
SCARB1-206ENST00000539320 HVCN1Q96D96 273 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 FAM212AQ96EL1 285 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 PHOX2BQ99453 314 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 CYP4F11Q9HBI6 524 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 SEL1LQ9UBV2 794 aa24.13■■□□□ 1.45
SCARB1-206ENST00000539320 MYMKA6NI61 221 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 ANKRD63C9JTQ0 380 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 RHOP08100 348 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 SLC39A14Q15043 492 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 JADE1Q6IE81 842 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 CCDC73Q6ZRK6 1079 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 SV2BQ7L1I2 683 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 BEST2Q8NFU1 509 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 GPR152Q8TDT2 470 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 FGF14Q92915 247 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 FAM86C1Q9NVL1 165 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 AFF4Q9UHB7 1163 aaKnown RBP24.12■■□□□ 1.45
SCARB1-206ENST00000539320 CA14Q9ULX7 337 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 MRPS23Q9Y3D9 190 aaKnown RBP24.12■■□□□ 1.45
SCARB1-206ENST00000539320 INSL5Q9Y5Q6 135 aa24.12■■□□□ 1.45
SCARB1-206ENST00000539320 KRBA1A5PL33 1030 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 TISP43B9A030 160 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 PPP1R37O75864 691 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 CPB1P15086 417 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 GAP43P17677 238 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 RFX1P22670 979 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 NASPP49321 788 aaPredicted RBP24.11■■□□□ 1.45
SCARB1-206ENST00000539320 YWHAHQ04917 246 aaPredicted RBP24.11■■□□□ 1.45
SCARB1-206ENST00000539320 SPATA1Q5VX52 437 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 ADALQ6DHV7 355 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 SLFN12LQ6IEE8 588 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 PARM1Q6UWI2 310 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 ZNF720Q7Z2F6 126 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 ING5Q8WYH8 240 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 DNAJC19Q96DA6 116 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 RTP3Q9BQQ7 232 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 AVENQ9NQS1 362 aaPredicted RBP24.11■■□□□ 1.45
SCARB1-206ENST00000539320 SLC2A4RGQ9NR83 387 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 STYXL1Q9Y6J8 313 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 MYH15Q9Y2K3 1946 aa24.11■■□□□ 1.45
SCARB1-206ENST00000539320 H0Y858 1186 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 SEC24AO95486 1093 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 NFICP08651 508 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 STAT6P42226 847 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 TMEM132DQ14C87 1099 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 STK38Q15208 465 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 SLC5A9Q2M3M2 681 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 DSTYKQ6XUX3 929 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 ATOH1Q92858 354 aaPredicted RBP24.1■■□□□ 1.45
SCARB1-206ENST00000539320 RPP25Q9BUL9 199 aaKnown RBP24.1■■□□□ 1.45
SCARB1-206ENST00000539320 MRPL44Q9H9J2 332 aaKnown RBP24.1■■□□□ 1.45
SCARB1-206ENST00000539320 ARHGEF3Q9NR81 526 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 AGO2Q9UKV8 859 aaKnown RBP24.1■■□□□ 1.45
SCARB1-206ENST00000539320 DERAQ9Y315 318 aa24.1■■□□□ 1.45
SCARB1-206ENST00000539320 TIMM13Q9Y5L4 95 aaPredicted RBP24.1■■□□□ 1.45
SCARB1-206ENST00000539320 PPEF2O14830 753 aa24.09■■□□□ 1.45
SCARB1-206ENST00000539320 OAZ2O95190 189 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms