RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NOL4O94818 638 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 KCNE1P15382 129 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 CSF2RAP15509 400 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 KRT9P35527 623 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 MYL6P60660 151 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 FIGNQ5HY92 759 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 IQCEQ6IPM2 695 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 SPOPLQ6IQ16 392 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 SCARA5Q6ZMJ2 495 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 CNGA4Q8IV77 575 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 ZNF397Q8NF99 534 aaPredicted RBP15.22■□□□□ 0.03
CD4-208ENST00000538827 HELQQ8TDG4 1101 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 SPAG5Q96R06 1193 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 TTYH3Q9C0H2 523 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 APEX2Q9UBZ4 518 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 ITGA11Q9UKX5 1188 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 LUC7L2Q9Y383 392 aaKnown RBP15.22■□□□□ 0.03
CD4-208ENST00000538827 COQ4Q9Y3A0 265 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 CDH23Q9H251 3354 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 ARL5CA6NH57 179 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 ENPP3O14638 875 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 PTGESO14684 152 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 POMCP01189 267 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 FGFR1P11362 822 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 UCHL3P15374 230 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
CD4-208ENST00000538827 IKBKEQ14164 716 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 MFSD5Q6N075 450 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 PDXDC1Q6P996 788 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 GLB1LQ6UWU2 654 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 ALKAL1Q6UXT8 129 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 RRAGAQ7L523 313 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 ZNF598Q86UK7 904 aaKnown RBP15.21■□□□□ 0.03
CD4-208ENST00000538827 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 LMO3Q8TAP4 145 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 URGCPQ8TCY9 931 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.03
CD4-208ENST00000538827 UBN1Q9NPG3 1134 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 TMEM161AQ9NX61 479 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 SIX4Q9UIU6 781 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 CAPN11Q9UMQ6 739 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 PLAGL2Q9UPG8 496 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 PCDHB7Q9Y5E2 793 aa15.21■□□□□ 0.03
CD4-208ENST00000538827 SCN1AP35498 2009 aa15.21■□□□□ 0.02
CD4-208ENST00000538827 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
CD4-208ENST00000538827 EOMESO95936 686 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 THP07101 528 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 ACRP10323 421 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 RFX1P22670 979 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 RBP5P82980 135 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 ZBED6P86452 979 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 ASIC2Q16515 512 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 TSR1Q2NL82 804 aaKnown RBP15.2■□□□□ 0.02
CD4-208ENST00000538827 XKR4Q5GH76 650 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 SCARA3Q6AZY7 606 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 PHLDB3Q6NSJ2 640 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 RPUSD2Q8IZ73 545 aaKnown RBP15.2■□□□□ 0.02
CD4-208ENST00000538827 TC2NQ8N9U0 490 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 KAT5Q92993 513 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 TATDN2Q93075 761 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 C1QTNF1Q9BXJ1 281 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 SLC38A7Q9NVC3 462 aa15.2■□□□□ 0.02
CD4-208ENST00000538827 TTC3P53804 2025 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 CASTOR2A6NHX0 329 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 RNF225M0QZC1 329 aaPredicted RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 PPEF2O14830 753 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 NRDCO43847 1150 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 CST3P01034 146 aaPredicted RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 PFKMP08237 780 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 GATMP50440 423 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 MFAP3P55082 362 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 FPGSQ05932 587 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 SOX4Q06945 474 aaPredicted RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 GRIK3Q13003 919 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.02
CD4-208ENST00000538827 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 CLLU1OSQ5K130 101 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 DPY19L2P1Q6NXN4 242 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.19■□□□□ 0.02
CD4-208ENST00000538827 NPAS4Q8IUM7 802 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 BAP1Q92560 729 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 BADQ92934 168 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 ZNF560Q96MR9 790 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 TSPAN18Q96SJ8 248 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 EDEM3Q9BZQ6 932 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 NIF3L1Q9GZT8 377 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 ELAC1Q9H777 363 aaKnown RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 APOBEC3GQ9HC16 384 aaKnown RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
CD4-208ENST00000538827 ZNHIT6Q9NWK9 470 aaKnown RBP15.19■□□□□ 0.02
CD4-208ENST00000538827 MIOSQ9NXC5 875 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms