RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 WDR44Q5JSH3 913 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 HP1BP3Q5SSJ5 553 aaPredicted RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 SWT1Q5T5J6 900 aaKnown RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 USP37Q86T82 979 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ANKS4BQ8N8V4 417 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 GLIS1Q8NBF1 620 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ATP6V0A1Q93050 837 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 JPH1Q9HDC5 661 aaPredicted RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 NINJ2Q9NZG7 142 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ANKFY1Q9P2R3 1169 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 HGSO14964 777 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 EXTL3O43909 919 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 DGAT1O75907 488 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 PROSCO94903 275 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 FDX1P10109 184 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 KRT10P13645 584 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 SP2Q02086 613 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 CENPCQ03188 943 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ZKSCAN8Q15776 578 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 KAZNQ674X7 775 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ROPN1BQ9BZX4 212 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ROPN1Q9HAT0 212 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ADAM22Q9P0K1 906 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 GAS8O95995 478 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 FSTL1Q12841 308 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 OR5B17Q8NGF7 314 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 IFT74Q96LB3 600 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 STMN4Q9H169 189 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 CCDC134Q9H6E4 229 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 AGO2Q9UKV8 859 aaKnown RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 TPX2Q9ULW0 747 aaKnown RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 NEU2Q9Y3R4 380 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
CPNE8-203ENST00000538596 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
CPNE8-203ENST00000538596 PEX10O60683 326 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 PSAPP07602 524 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 ZSCAN5DPP0CG00 497 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 ATP4AP20648 1035 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 GNA15P30679 374 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 XRCC4Q13426 336 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 ENOSF1Q7L5Y1 443 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 TRPM8Q7Z2W7 1104 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 MCPH1Q8NEM0 835 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 ASAP3Q8TDY4 903 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 GPRASP2Q96D09 838 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SGSM3Q96HU1 749 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SERPINB12Q96P63 405 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 OSBPL8Q9BZF1 889 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 C17orf75Q9HAS0 396 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SLC9A2Q9UBY0 812 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 LRRIQ4A6NIV6 560 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 TLR3O15455 904 aaKnown RBP12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SNX3O60493 162 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 ETS1P14921 441 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 BRAFP15056 766 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SLC1A1P43005 524 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 NOMO3P69849 1222 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 CUL2Q13617 745 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 EMC2Q15006 297 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 PSMD6Q15008 389 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 NUGGCQ68CJ6 796 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 CYP4F22Q6NT55 531 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 HIBCHQ6NVY1 386 aaPredicted RBP12.71□□□□□ -0.37
CPNE8-203ENST00000538596 CROCCP2Q86T23 111 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
CPNE8-203ENST00000538596 SENP7Q9BQF6 1050 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 TARS2Q9BW92 718 aaKnown RBP12.71□□□□□ -0.37
CPNE8-203ENST00000538596 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 FHDC1Q9C0D6 1143 aaPredicted RBP12.71□□□□□ -0.37
CPNE8-203ENST00000538596 HOMER3Q9NSC5 361 aa12.71□□□□□ -0.37
CPNE8-203ENST00000538596 MYH9P35579 1960 aaKnown RBP12.71□□□□□ -0.38
CPNE8-203ENST00000538596 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.38
CPNE8-203ENST00000538596 GHRP10912 638 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.38
CPNE8-203ENST00000538596 HMGCS2P54868 508 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 ITIH4Q14624 930 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 IZUMO3Q5VZ72 239 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 ZNF365Q70YC5 407 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 GSTA5Q7RTV2 222 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms