RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 EDRF1Q3B7T1 1238 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ZNF568Q3ZCX4 644 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 EARS2Q5JPH6 523 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 IFIT1BQ5T764 474 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 FAM91A1Q658Y4 838 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 KLC3Q6P597 504 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ADGRG6Q86SQ4 1221 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 NT5DC3Q86UY8 548 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 VSIG1Q86XK7 387 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 WFDC8Q8IUA0 241 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 RELL1Q8IUW5 271 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 TRIM59Q8IWR1 403 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 RNF168Q8IYW5 571 aaPredicted RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 FAM13CQ8NE31 585 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 RSPH1Q8WYR4 309 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 EDEM1Q92611 657 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 PLD4Q96BZ4 506 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ZNF496Q96IT1 587 aaPredicted RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 SPACA7Q96KW9 195 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 LRRC37BQ96QE4 947 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 BRIP1Q9BX63 1249 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 DDX47Q9H0S4 455 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 AZI2Q9H6S1 392 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 EPB41L4AQ9HCS5 686 aaPredicted RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 TYW1Q9NV66 732 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 TBCCD1Q9NVR7 557 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 NKIRAS1Q9NYS0 192 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 DLGAP2Q9P1A6 1054 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 WHRNQ9P202 907 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 STX18Q9P2W9 335 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 AMACRQ9UHK6 382 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 DDX25Q9UHL0 483 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 ANGPTL2Q9UKU9 493 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 MAPK8IP1Q9UQF2 711 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ZNF148Q9UQR1 794 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 STK38LQ9Y2H1 464 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 TBC1D30Q9Y2I9 924 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 PFASO15067 1338 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 TNKSO95271 1327 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 FLT1P17948 1338 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 MROH5Q6ZUA9 1318 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ADGRA3Q8IWK6 1321 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 PCDH11YQ9BZA8 1340 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 COL1A1P02452 1464 aaPredicted RBP7.15□□□□□ -1.27
USP28-207ENST00000538475 SCN4AP35499 1836 aa7.15□□□□□ -1.27
USP28-207ENST00000538475 A0A087X0T9 212 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 CETN3O15182 167 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 TTI1O43156 1089 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 RIPK2O43353 540 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 CCDC22O60826 627 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 CSDE1O75534 798 aaKnown RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 IDH1O75874 414 aaKnown RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 FAM228BP0C875 321 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 PABPC4LP0CB38 370 aaKnown RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 PHKG2P15735 406 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 LMNB1P20700 586 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 MUTP22033 750 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 SMARCA1P28370 1054 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ADORA1P30542 326 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 STX2P32856 288 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 FLT3P36888 993 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 EPS15P42566 896 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 GATA4P43694 442 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 BAG6P46379 1132 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 EIF1AXP47813 144 aaKnown RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 ACADVLP49748 655 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 CACNA2D1P54289 1103 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 POLE2P56282 527 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ARHGAP4P98171 946 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 HYAL2Q12891 473 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 SLC29A2Q14542 456 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 MYBPC3Q14896 1274 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 TRADDQ15628 312 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 CCDC6Q16204 474 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ENOX2Q16206 610 aaKnown RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 SLC4A8Q2Y0W8 1093 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ZCWPW2Q504Y3 356 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 C1QTNF12Q5T7M4 302 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 TRIM68Q6AZZ1 485 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ALKBH2Q6NS38 261 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ALKBH5Q6P6C2 394 aaKnown RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 PIK3AP1Q6ZUJ8 805 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ZNF438Q7Z4V0 828 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 IRF2BP2Q7Z5L9 587 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 FRMD5Q7Z6J6 570 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 PHLDB2Q86SQ0 1253 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 DAAM2Q86T65 1068 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 EXOC3L1Q86VI1 746 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 DDX42Q86XP3 938 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP28-207ENST00000538475 JAMLQ86YT9 394 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 MYOCDQ8IZQ8 938 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ANKRD13CQ8N6S4 541 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 VGLL2Q8N8G2 317 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 ENAHQ8N8S7 591 aaPredicted RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 C12orf50Q8NA57 414 aaPredicted RBP7.14□□□□□ -1.27
USP28-207ENST00000538475 KIAA0895Q8NCT3 520 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 BBOF1Q8ND07 529 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 OR13H1Q8NG92 308 aa7.14□□□□□ -1.27
USP28-207ENST00000538475 RFFLQ8WZ73 363 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms