RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MRE11P49959 708 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 SLC7A5Q01650 507 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 RAD51AP2Q09MP3 1159 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 DPYDQ12882 1025 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 BIRC3Q13489 604 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 MEA1Q16626 185 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 KMT5BQ4FZB7 885 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ARHGAP15Q53QZ3 475 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF667Q5HYK9 610 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 IQCEQ6IPM2 695 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ZSCAN30Q86W11 494 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 UNC93AQ86WB7 457 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 TOP6BLQ8N6T0 577 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ENOX1Q8TC92 643 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 GOLGA1Q92805 767 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 MRPL38Q96DV4 380 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 KIF12Q96FN5 646 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 AGAP3Q96P47 875 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 BPIFA3Q9BQP9 254 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC113Q9H0I3 377 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 WNT8AQ9H1J5 351 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ENTPD7Q9NQZ7 604 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 CNTN3Q9P232 1028 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 JRKLQ9Y4A0 524 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 IPPQ9Y573 584 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 COMMD10Q9Y6G5 202 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 GTPBP10A4D1E9 387 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF189O75820 626 aaPredicted RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 DGKIO75912 1065 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 NR3C1P04150 777 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 SETSIPP0DME0 302 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 DDX6P26196 483 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 PEX19P40855 299 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 GOLGA8FQ08AF8 430 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 GOLGA8DPQ0D2H9 430 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ADAM9Q13443 819 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 TSNAXIP1Q2TAA8 658 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 HABP4Q5JVS0 413 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 NT5DC1Q5TFE4 455 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 KRT39Q6A163 491 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 MAEAQ7L5Y9 396 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 OTOP2Q7RTS6 562 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 TRMT1LQ7Z2T5 733 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 SPPL2BQ8TCT7 592 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 TRAPPC12Q8WVT3 735 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 CLP1Q92989 425 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 SNX27Q96L92 541 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 CLIC6Q96NY7 704 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 TARS2Q9BW92 718 aaKnown RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 IRX2Q9BZI1 471 aaPredicted RBP3.84□□□□□ -1.79
PTPN22-211ENST00000538253 CDT1Q9H211 546 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 PDZD7Q9H5P4 517 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 HSPBP1Q9NZL4 362 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 BLOC1S6Q9UL45 172 aa3.84□□□□□ -1.79
PTPN22-211ENST00000538253 ZBTB42B2RXF5 422 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 H3BNC9 293 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 NBNO60934 754 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 RECQL4O94761 1208 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 SOD2P04179 222 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 SYN1P17600 705 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 NR2F2P24468 414 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 HOXA9P31269 272 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 OR1G1P47890 313 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 NDUFA8P51970 172 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 MYL5Q02045 173 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 ITIH3Q06033 890 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 PABPC1LQ4VXU2 614 aaKnown RBP3.84□□□□□ -1.8
PTPN22-211ENST00000538253 SPATA1Q5VX52 437 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 KCNT2Q6UVM3 1135 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 GBP6Q6ZN66 633 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 NUDT18Q6ZVK8 323 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 TMC7Q7Z402 723 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF598Q86UK7 904 aaKnown RBP3.84□□□□□ -1.8
PTPN22-211ENST00000538253 DDX42Q86XP3 938 aaKnown RBP eCLIP3.84□□□□□ -1.8
PTPN22-211ENST00000538253 CSGALNACT2Q8N6G5 542 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 COLGALT1Q8NBJ5 622 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 PDZD8Q8NEN9 1154 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 CMASQ8NFW8 434 aaPredicted RBP3.84□□□□□ -1.8
PTPN22-211ENST00000538253 ACSF2Q96CM8 615 aaPredicted RBP3.84□□□□□ -1.8
PTPN22-211ENST00000538253 DNAJC19Q96DA6 116 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 MSANTD3Q96H12 275 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 SCLYQ96I15 445 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 NT5C1BQ96P26 610 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 CEP89Q96ST8 783 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 IFT122Q9HBG6 1241 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM8AQ9HCN3 771 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 ABCB6Q9NP58 842 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 TLR9Q9NR96 1032 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 AGPAT3Q9NRZ7 376 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 RABL2AQ9UBK7 228 aaPredicted RBP3.84□□□□□ -1.8
PTPN22-211ENST00000538253 HESX1Q9UBX0 185 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 MYO6Q9UM54 1294 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 NR2E1Q9Y466 385 aa3.84□□□□□ -1.8
PTPN22-211ENST00000538253 PROZP22891 400 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 DNAJB2P25686 324 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TRPC1P48995 793 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MXI1P50539 228 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MFAP3P55082 362 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF394Q53GI3 561 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 XKR4Q5GH76 650 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms