RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 CHADO15335 359 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 EXTL3O43909 919 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
CLPB-208ENST00000538021 TOP3BO95985 862 aaKnown RBP12.28□□□□□ -0.44
CLPB-208ENST00000538021 CTHP32929 405 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 RBM25P49756 843 aaKnown RBP12.28□□□□□ -0.44
CLPB-208ENST00000538021 RING1Q06587 406 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 TWF1Q12792 350 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 PRPF4BQ13523 1007 aaKnown RBP12.28□□□□□ -0.44
CLPB-208ENST00000538021 UPP1Q16831 310 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 LRSAM1Q6UWE0 723 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 NEK8Q86SG6 692 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 E2F7Q96AV8 911 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 RSPRY1Q96DX4 576 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 JAKMIP1Q96N16 626 aaKnown RBP12.28□□□□□ -0.44
CLPB-208ENST00000538021 EDEM2Q9BV94 578 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 TRPV4Q9HBA0 871 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 GPRC5CQ9NQ84 441 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 GTSE1Q9NYZ3 720 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 CEP72Q9P209 647 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 LHX6Q9UPM6 363 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 USP20Q9Y2K6 914 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 PCDHGA5Q9Y5G8 931 aa12.28□□□□□ -0.44
CLPB-208ENST00000538021 SPAG17Q6Q759 2223 aa12.27□□□□□ -0.44
CLPB-208ENST00000538021 LAMA5O15230 3695 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 TMEM8BA6NDV4 472 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
CLPB-208ENST00000538021 NPY5RQ15761 445 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 SH3PXD2AQ5TCZ1 1133 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 BLOC1S2Q6QNY1 142 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 RALGPS2Q86X27 583 aaPredicted RBP12.27□□□□□ -0.45
CLPB-208ENST00000538021 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 SYNPOQ8N3V7 929 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 LEMD2Q8NC56 503 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 DAGLBQ8NCG7 672 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 ZCCHC14Q8WYQ9 949 aaKnown RBP12.27□□□□□ -0.45
CLPB-208ENST00000538021 ZFYVE19Q96K21 471 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 UROC1Q96N76 676 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 AIFM3Q96NN9 605 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
CLPB-208ENST00000538021 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
CLPB-208ENST00000538021 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
CLPB-208ENST00000538021 GPR88Q9GZN0 384 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 FZD8Q9H461 694 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 ANKEF1Q9NU02 776 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 FBXL5Q9UKA1 691 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 KCNJ14Q9UNX9 436 aa12.27□□□□□ -0.45
CLPB-208ENST00000538021 NBEAQ8NFP9 2946 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 DMXL2Q8TDJ6 3036 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 A0A1W2PRU2 124 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 H7C4K7 107 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 DPYSL4O14531 572 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 DEXIO95424 95 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 BAG4O95429 457 aaKnown RBP12.26□□□□□ -0.45
CLPB-208ENST00000538021 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
CLPB-208ENST00000538021 RARRES1P49788 294 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 CREB5Q02930 508 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 FCHO2Q0JRZ9 810 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 CCINQ13939 588 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 MAPK6Q16659 721 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 FAM187BQ17R55 369 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 DAB2IPQ5VWQ8 1189 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 EEF1DP3Q658K8 133 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 TPGS2Q68CL5 300 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 CDCA2Q69YH5 1023 aaPredicted RBP12.26□□□□□ -0.45
CLPB-208ENST00000538021 PKN3Q6P5Z2 889 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 SLFN12Q8IYM2 578 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 SHKBP1Q8TBC3 707 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 PIGOQ8TEQ8 1089 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 SCNM1Q9BWG6 230 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 C2orf40Q9H1Z8 148 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 SLC8A2Q9UPR5 921 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 WASF3Q9UPY6 502 aa12.26□□□□□ -0.45
CLPB-208ENST00000538021 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 CPLX1O14810 134 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 LYPLA2O95372 231 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 PLK5Q496M5 336 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 GATA6Q92908 595 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 COL26A1Q96A83 441 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 ZC3H10Q96K80 434 aaKnown RBP12.25□□□□□ -0.45
CLPB-208ENST00000538021 HSD17B14Q9BPX1 270 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 AFF4Q9UHB7 1163 aaKnown RBP12.25□□□□□ -0.45
CLPB-208ENST00000538021 NUB1Q9Y5A7 615 aa12.25□□□□□ -0.45
CLPB-208ENST00000538021 DSPP15924 2871 aaKnown RBP12.25□□□□□ -0.45
CLPB-208ENST00000538021 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 SMG1Q96Q15 3661 aaKnown RBP12.24□□□□□ -0.45
CLPB-208ENST00000538021 SMIM28A0A1B0GU29 152 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 ACKR2O00590 384 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 PODXLO00592 558 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 SYN3O14994 580 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 AKAP3O75969 853 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 CPB1P15086 417 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 ATP2B1P20020 1258 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 RPS6KB1P23443 525 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 EPHA5P54756 1037 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms