RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TBK1Q9UHD2 729 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 NAGPAQ9UK23 515 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9□□□□□ -0.97
SRGAP1-202ENST00000537556 NEU2Q9Y3R4 380 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 TTLL13PA6NNM8 815 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 B2RBV5 119 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 H3BSA7 217 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 USP1O94782 785 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 KRT75O95678 551 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 STT3AP46977 705 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 C21orf59P57076 290 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 TIMM10P62072 90 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 SUZ12Q15022 739 aaKnown RBP9□□□□□ -0.97
SRGAP1-202ENST00000537556 WDR45BQ5MNZ6 344 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 ADAT2Q7Z6V5 191 aaKnown RBP9□□□□□ -0.97
SRGAP1-202ENST00000537556 CENPSQ8N2Z9 138 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 RAB3IL1Q8TBN0 382 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 PPP4R1Q8TF05 950 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 CHPT1Q8WUD6 406 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 CCDC138Q96M89 665 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 CTRCQ99895 268 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 CENPOQ9BU64 300 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 C17orf75Q9HAS0 396 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 PALMDQ9NP74 551 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 SENP1Q9P0U3 644 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 HERC5Q9UII4 1024 aaKnown RBP9□□□□□ -0.97
SRGAP1-202ENST00000537556 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 SUGT1Q9Y2Z0 365 aa9□□□□□ -0.97
SRGAP1-202ENST00000537556 TBKBP1A7MCY6 615 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 KMOO15229 486 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 TEX28O15482 410 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 THAP12O43422 761 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 STAM2O75886 525 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 S100BP04271 92 aaPredicted RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 IGKV5-2P06315 115 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 LMNB1P20700 586 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 HOXD10P28358 340 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 HOXD13P35453 343 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 NCKAP1LP55160 1127 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 RPS3AP61247 264 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 WASHC5Q12768 1159 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 STAT4Q14765 748 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 WTAPQ15007 396 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 PHKG1Q16816 387 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 RABL6Q3YEC7 729 aaPredicted RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 NAALADL2Q58DX5 795 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 CCSAPQ6IQ19 270 aaPredicted RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 CATIPQ7Z7H3 387 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 FANCBQ8NB91 859 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 GDPD5Q8WTR4 605 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 SPOCK2Q92563 424 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 CEP295NLQ96MC4 621 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 LSM14BQ9BX40 385 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 PUS7LQ9H0K6 701 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 SEMA6BQ9H3T3 888 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 EHD1Q9H4M9 534 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 TMOD2Q9NZR1 351 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 DENND2AQ9ULE3 1009 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 SYNGAP1Q96PV0 1343 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 ANKRD34BA5PLL1 514 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 GOLGA8CPA6NN73 597 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 POTECB2RU33 542 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 NKRFO15226 690 aaKnown RBP eCLIP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 NOL4O94818 638 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 GGPS1O95749 300 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 FUCA1P04066 466 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 PMLP29590 882 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 HOXA7P31268 230 aaPredicted RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 MCM7P33993 719 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 TUFMP49411 452 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 ASIC1P78348 528 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 TCIRG1Q13488 830 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 GGT6Q6P531 493 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 CCDC137Q6PK04 289 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 VASH1Q7L8A9 365 aaPredicted RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 TMC7Q7Z402 723 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 ULK2Q8IYT8 1036 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 SIX5Q8N196 739 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 OR7G1Q8NGA0 311 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 C18orf8Q96DM3 657 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 OLFM1Q99784 485 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 PAIP1Q9H074 479 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 C10orf88Q9H8K7 445 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 ERVK-5Q9HDB9 667 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 RIC8AQ9NPQ8 531 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 CNGB3Q9NQW8 809 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 IGSF9Q9P2J2 1179 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 DCTN4Q9UJW0 460 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 PEAK1Q9H792 1746 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 ZMYM2Q9UBW7 1377 aa8.99□□□□□ -0.97
SRGAP1-202ENST00000537556 A0A0G2JND7 137 aa8.98□□□□□ -0.97
SRGAP1-202ENST00000537556 K7EPI3 171 aa8.98□□□□□ -0.97
SRGAP1-202ENST00000537556 FARP2O94887 1054 aaPredicted RBP8.98□□□□□ -0.97
SRGAP1-202ENST00000537556 CAMTA2O94983 1202 aa8.98□□□□□ -0.97
SRGAP1-202ENST00000537556 COPB2P35606 906 aa8.98□□□□□ -0.97
SRGAP1-202ENST00000537556 FDFT1P37268 417 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms