RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	SLC38A7	Q9NVC3	462 aa		11.79	□□□□□ -0.52
LDHA-215	ENST00000537296	STK39	Q9UEW8	545 aa		11.79	□□□□□ -0.52
LDHA-215	ENST00000537296	ATP6V1D	Q9Y5K8	247 aa		11.79	□□□□□ -0.52
LDHA-215	ENST00000537296	TSC2	P49815	1807 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	FAM237A	A0A1B0GTK4	181 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	FSD2	A1L4K1	749 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	SP100	P23497	879 aa	Predicted RBP	11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	ABCD1	P33897	745 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	NUCB2	P80303	420 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	PSMD5	Q16401	504 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	FAM26F	Q5R3K3	315 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	SLFN12L	Q6IEE8	588 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	TMC5	Q6UXY8	1006 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	ADHFE1	Q8IWW8	467 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	NELFCD	Q8IXH7	590 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	SYCP3	Q8IZU3	236 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	SCFD1	Q8WVM8	642 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	PIK3R5	Q8WYR1	880 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	SLC39A2	Q9NP94	309 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	MAN1C1	Q9NR34	630 aa		11.78	□□□□□ -0.52
LDHA-215	ENST00000537296	TULP1	O00294	542 aa	Predicted RBP	11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	TGFB1I1	O43294	461 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	TGM5	O43548	720 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	RFPL2	O75678	378 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	ADH1A	P07327	375 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	SRGAP2B	P0DMP2	458 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	SSTR3	P32745	418 aa	Predicted RBP	11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	SYK	P43405	635 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	ALCAM	Q13740	583 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	CBX2	Q14781	532 aa	Predicted RBP	11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	PPP1R15B	Q5SWA1	713 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	PPFIBP1	Q86W92	1011 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	EFCAB13	Q8IY85	973 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	GJD3	Q8N144	294 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	ZNF507	Q8TCN5	953 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	NOC3L	Q8WTT2	800 aa	Known RBP	11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	ADAM7	Q9H2U9	754 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	POMK	Q9H5K3	350 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	FNIP2	Q9P278	1114 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	EXOC7	Q9UPT5	735 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296	SSX2IP	Q9Y2D8	614 aa		11.77	□□□□□ -0.52
LDHA-215	ENST00000537296		A0A1W2PQ27	194 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296		A0A1W2PQ64	194 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296		A0A1W2PQD8	194 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	GLUD1	P00367	558 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	HOXB8	P17481	243 aa	Predicted RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	LRPAP1	P30533	357 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	RPL9	P32969	192 aa	Known RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	MCM4	P33991	863 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	FOXK1	P85037	733 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	ELAVL2	Q12926	359 aa	Known RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	STK4	Q13043	487 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	DSG2	Q14126	1118 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	TMEM132D	Q14C87	1099 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	KYAT1	Q16773	422 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	KMT5B	Q4FZB7	885 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	SPATA1	Q5VX52	437 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	LILRA6	Q6PI73	481 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	KIAA0895	Q8NCT3	520 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	RPGRIP1	Q96KN7	1286 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	TMEM206	Q9H813	350 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	UBQLN1	Q9UMX0	589 aa	Known RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	FAM50B	Q9Y247	325 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	NUB1	Q9Y5A7	615 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	PVALEF	A0A1B0GWK0	134 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	CLIC2	O15247	247 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	SPTLC1	O15269	473 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	EIF3D	O15371	548 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	GART	P22102	1010 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	OR1D2	P34982	312 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	POSTN	Q15063	836 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	VARS2	Q5ST30	1063 aa	Known RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	ARMCX5	Q6P1M9	558 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	MAMSTR	Q6ZN01	415 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	KRBA2	Q6ZNG9	492 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	CBWD2	Q8IUF1	395 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	GPR65	Q8IYL9	337 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	SUSD3	Q96L08	255 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	PYM1	Q9BRP8	204 aa	Known RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	EPHX3	Q9H6B9	360 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	SFXN1	Q9H9B4	322 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	PDE11A	Q9HCR9	933 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	3e-11	■□□□□ 9.5
LDHA-215	ENST00000537296	DZANK1	Q9NVP4	752 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	RBAK	Q9NYW8	714 aa	Predicted RBP	11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	MTRR	Q9UBK8	725 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	PRKAG3	Q9UGI9	489 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	CDY1	Q9Y6F8	540 aa		11.76	□□□□□ -0.53
LDHA-215	ENST00000537296	PTPRJ	Q12913	1337 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	CCDC195	A0A1B0GUA6	201 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	LOC730098	B7Z3J9	87 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	EXTL3	O43909	919 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	ZNF202	O95125	648 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	CYP3A5	P20815	502 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	ITIH3	Q06033	890 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	C9orf57	Q5W0N0	161 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	CES5A	Q6NT32	575 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms