RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 MMP16P51512 607 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 NTHL1P78549 312 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 KCNH2Q12809 1159 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 ORC2Q13416 577 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 SNW1Q13573 536 aaKnown RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 MRPL58Q14197 206 aaKnown RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 PUM1Q14671 1186 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 ANKRD1Q15327 319 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 MLF2Q15773 248 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 UPP1Q16831 310 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 OTOGLQ3ZCN5 2332 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 PPM1LQ5SGD2 360 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 AXDND1Q5T1B0 1012 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 NT5DC1Q5TFE4 455 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 FAM171A1Q5VUB5 890 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 RALGAPA1Q6GYQ0 2036 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 SLC8B1Q6J4K2 584 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 NPAS3Q8IXF0 933 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 C4orf32Q8N8J7 132 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 C3orf58Q8NDZ4 430 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 ZNF461Q8TAF7 563 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 ITFG1Q8TB96 612 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 NUP210Q8TEM1 1887 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 ZNF516Q92618 1163 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 RUBCNQ92622 972 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 GTF3C6Q969F1 213 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 NELL2Q99435 816 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 APOL6Q9BWW8 343 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 PLA2G2FQ9BZM2 168 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 FOXQ1Q9C009 403 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 PTPRHQ9HD43 1115 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 LTB4R2Q9NPC1 389 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 TRPV5Q9NQA5 729 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 EVA1BQ9NVM1 165 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 GDE1Q9NZC3 331 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 KIF26AQ9ULI4 1882 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-204ENST00000537068 CACNA1AO00555 2505 aa5.78□□□□□ -1.48
SNHG1-204ENST00000537068 GVINP1Q7Z2Y8 2422 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 SMIM28A0A1B0GU29 152 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 MED19A0JLT2 244 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ABLIM1O14639 778 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 CCL16O15467 120 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 XYLBO75191 536 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PRKCBP05771 671 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 TDGF1P13385 188 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ATF2P15336 505 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PTPN2P17706 415 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 FCARP24071 287 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 CLCNKBP51801 687 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 EFNA5P52803 228 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 MLLT6P55198 1093 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PFKPQ01813 784 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 SOX4Q06945 474 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ST3GAL1Q11201 340 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PRPF4BQ13523 1007 aaKnown RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PDIA5Q14554 519 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ECM1Q16610 540 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 MAPK6Q16659 721 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 DCAF4L1Q3SXM0 396 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PRSS36Q5K4E3 855 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 SPECC1Q5M775 1068 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ZBTB41Q5SVQ8 909 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 LIN9Q5TKA1 542 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 EEF1DP3Q658K8 133 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ANKS3Q6ZW76 656 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 MAEAQ7L5Y9 396 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 CEP57Q86XR8 500 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 NOSTRINQ8IVI9 506 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ZBTB8OSQ8IWT0 167 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 DIS3L2Q8IYB7 885 aaKnown RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 TCEAL8Q8IYN2 117 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 KIAA2013Q8IYS2 634 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 DCLK2Q8N568 766 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 GPR161Q8N6U8 529 aaKnown RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ST13P5Q8NFI4 369 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 SLC7A14Q8TBB6 771 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 HASPINQ8TF76 798 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ELSPBP1Q96BH3 223 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 UROC1Q96N76 676 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 OCSTAMPQ9BR26 566 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 ADPGKQ9BRR6 497 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 NTPCRQ9BSD7 190 aaKnown RBP5.77□□□□□ -1.49
SNHG1-204ENST00000537068 BRMS1Q9HCU9 246 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 HCFC1R1Q9NWW0 138 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 MAFFQ9ULX9 164 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 TNFSF13BQ9Y275 285 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 USP20Q9Y2K6 914 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 PCDHGA2Q9Y5H1 932 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 CDY1Q9Y6F8 540 aa5.77□□□□□ -1.49
SNHG1-204ENST00000537068 EML5Q05BV3 1969 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 WDR27A2RRH5 827 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 FAM170BA6NMN3 283 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 NRG2O14511 850 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-204ENST00000537068 SYN3O14994 580 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 NCAM2O15394 837 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-204ENST00000537068 LAMTOR5O43504 91 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 TRAPPC3O43617 180 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 ATP9BO43861 1147 aa5.76□□□□□ -1.49
SNHG1-204ENST00000537068 KINO60870 393 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms