RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZNF720Q7Z2F6 126 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 MAP4K3Q8IVH8 894 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 C1orf210Q8IVY1 113 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 MYCT1Q8N699 235 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 CEP120Q8N960 986 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 PJA1Q8NG27 643 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 SLC7A14Q8TBB6 771 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 HVCN1Q96D96 273 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
PRKDC-207ENST00000536483 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
PRKDC-207ENST00000536483 ACAP3Q96P50 834 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 SEMA4AQ9H3S1 761 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 CUEDC2Q9H467 287 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 SLC38A7Q9NVC3 462 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 STYXL1Q9Y6J8 313 aa13.58□□□□□ -0.24
PRKDC-207ENST00000536483 A0A087X0B3 334 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 MYMKA6NI61 221 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 CUTAO60888 179 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 XYLBO75191 536 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 B3GAT3O94766 335 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 FGFR3P22607 806 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 HOXA9P31269 272 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 OR1D2P34982 312 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 RAB33AQ14088 237 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 STK38Q15208 465 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 E2F4Q16254 413 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 UPP1Q16831 310 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 PDXDC1Q6P996 788 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 RSPO2Q6UXX9 243 aaPredicted RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 RASSF8Q8NHQ8 419 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 DDX12PQ92771 950 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 SHDQ96IW2 340 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 HAPLN2Q9GZV7 340 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 OLFML3Q9NRN5 406 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 KBTBD4Q9NVX7 518 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 HCFC1R1Q9NWW0 138 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 TFIP11Q9UBB9 837 aaKnown RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
PRKDC-207ENST00000536483 RCOR1Q9UKL0 485 aa13.57□□□□□ -0.24
PRKDC-207ENST00000536483 ZNF292O60281 2723 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 CACNA1IQ9P0X4 2223 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 A0A0B4J269 797 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 TTC26A0AVF1 554 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
PRKDC-207ENST00000536483 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
PRKDC-207ENST00000536483 CLTAP09496 248 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 GAP43P17677 238 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 CLCNKBP51801 687 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
PRKDC-207ENST00000536483 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 UVSSAQ2YD98 709 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 MTSS1LQ765P7 747 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 MTRRQ9UBK8 725 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 CFAP45Q9UL16 551 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 DMXL1Q9Y485 3027 aa13.56□□□□□ -0.24
PRKDC-207ENST00000536483 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 FRYLO94915 3013 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 KANSL1LA0AUZ9 987 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 I3L4J1 428 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 OGTO15294 1046 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 KRT18P05783 430 aaKnown RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 CYP3A5P20815 502 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 SOX4Q06945 474 aaPredicted RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 PKP1Q13835 747 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 PABPC1LQ4VXU2 614 aaKnown RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 SLC44A4Q53GD3 710 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 ZC3H14Q6PJT7 736 aaKnown RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 SHC4Q6S5L8 630 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 CD302Q8IX05 232 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 NPAS3Q8IXF0 933 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 KIAA2013Q8IYS2 634 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 MAML2Q8IZL2 1156 aaPredicted RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 KXD1Q9BQD3 176 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 LRRC27Q9C0I9 530 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 TNMDQ9H2S6 317 aa13.55□□□□□ -0.24
PRKDC-207ENST00000536483 MTF2Q9Y483 593 aaPredicted RBP13.55□□□□□ -0.24
PRKDC-207ENST00000536483 COL4A3Q01955 1670 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 K7ENM7 598 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 HNRNPDLO14979 420 aaKnown RBP13.54□□□□□ -0.24
PRKDC-207ENST00000536483 TRAPPC3O43617 180 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 POU2F2P09086 479 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 CD72P21854 359 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 NMT1P30419 496 aaKnown RBP13.54□□□□□ -0.24
PRKDC-207ENST00000536483 STAT6P42226 847 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 BRCC3P46736 316 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 LIG4P49917 911 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms