RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TTC7BQ86TV6 843 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ST13P4Q8IZP2 240 aaPredicted RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 POU5F2Q8N7G0 328 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PYDC1Q8WXC3 89 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CENPTQ96BT3 561 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 FBXL8Q96CD0 374 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NOX5Q96PH1 765 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 SLC4A9Q96Q91 983 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 LRRC37BQ96QE4 947 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 SETDB2Q96T68 719 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 TBCBQ99426 244 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 FMO2Q99518 471 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ECSITQ9BQ95 431 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PITPNM3Q9BZ71 974 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CCDC68Q9H2F9 335 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 RNF41Q9H4P4 317 aaPredicted RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 RETREG1Q9H6L5 497 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 UBN1Q9NPG3 1134 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NMRK2Q9NPI5 230 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 FBXO6Q9NRD1 293 aaPredicted RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 BABAM1Q9NWV8 329 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 HACD3Q9P035 362 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 SEL1LQ9UBV2 794 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 LIMD1Q9UGP4 676 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CCPG1Q9ULG6 757 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 COQ6Q9Y2Z9 468 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 UTP11Q9Y3A2 253 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 STK36Q9NRP7 1315 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PCP4L1A6NKN8 68 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 POTECB2RU33 542 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 H3BUI4 141 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 NFKBIEO00221 500 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 HIP1O00291 1037 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PEX1O43933 1283 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 TMCC2O75069 709 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 TRPA1O75762 1119 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 ZBED1O96006 694 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 TFAP2AP05549 437 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PABPC4LP0CB38 370 aaKnown RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 FGFR1P11362 822 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 COL6A1P12109 1028 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 MARK3P27448 753 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 TCF7P36402 384 aaPredicted RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 BTDP43251 543 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 METAP2P50579 478 aaKnown RBP eCLIP3.94□□□□□ -1.78
MCF2-210ENST00000536274 MAPK10P53779 464 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 CDR2Q01850 454 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 OCRLQ01968 901 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PLCB3Q01970 1234 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 FKBP4Q02790 459 aaKnown RBP eCLIP3.94□□□□□ -1.78
MCF2-210ENST00000536274 C1orf141Q5JVX7 400 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 HP1BP3Q5SSJ5 553 aaPredicted RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 TMTC4Q5T4D3 741 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 HGSNATQ68CP4 663 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 NEPROQ6NW34 567 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 B3GNT6Q6ZMB0 384 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 ANKMY2Q8IV38 441 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 NOSTRINQ8IVI9 506 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 FAM20CQ8IXL6 584 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 SRRM1Q8IYB3 904 aaKnown RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 METTL13Q8N6R0 699 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 STKLD1Q8NE28 680 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 DIS3LQ8TF46 1054 aaKnown RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 C7orf43Q8WVR3 580 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 NLRP7Q8WX94 980 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 SHISA4Q96DD7 197 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 VPS50Q96JG6 964 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 FAM161BQ96MY7 647 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 GCNAQ96QF7 691 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 AGXT2Q9BYV1 514 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 EHD1Q9H4M9 534 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 EPS8L2Q9H6S3 715 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 NPHS2Q9NP85 383 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 EXOC1Q9NV70 894 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 DBF4Q9UBU7 674 aaPredicted RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 CHORDC1Q9UHD1 332 aaPredicted RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 CIDEBQ9UHD4 219 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 ADAMTS1Q9UHI8 967 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PACSIN3Q9UKS6 424 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PPP1R9AQ9ULJ8 1098 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PTPN22Q9Y2R2 807 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 AFG3L2Q9Y4W6 797 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 H0YIN7 160 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 FOXP2O15409 715 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 GMNNO75496 209 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 ZFYP08048 801 aaPredicted RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 C6orf222P0C671 652 aaPredicted RBP3.94□□□□□ -1.78
MCF2-210ENST00000536274 KCNA2P16389 499 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 TAC1P20366 129 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 ENPP1P22413 925 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 SERPINB8P50452 374 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PDE1BQ01064 536 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 DSG1Q02413 1049 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 E2F2Q14209 437 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 LPIN1Q14693 890 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PDK1Q15118 436 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 PLEKHG4Q58EX7 1191 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 MPRIPQ6WCQ1 1025 aa3.94□□□□□ -1.78
MCF2-210ENST00000536274 RNF111Q6ZNA4 994 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms