RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 EGFRP00533 1210 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 PIGRP01833 764 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 VIMP08670 466 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 DSG3P32926 999 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 CHKAP35790 457 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 ACOT2P49753 483 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 POLGP54098 1239 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 EMC2Q15006 297 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 SPRED3Q2MJR0 410 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 PLEKHA7Q6IQ23 1121 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 PHLDB2Q86SQ0 1253 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 RELL1Q8IUW5 271 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 CCDC50Q8IVM0 306 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 EXD1Q8NHP7 514 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 TELO2Q9Y4R8 837 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 SCINQ9Y6U3 715 aa17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 MYH9P35579 1960 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-202ENST00000535997 K7ERI5 159 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 VNN1O95497 513 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 SUPT20HL2P0C7V6 817 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 NOMO3P69849 1222 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 SP4Q02446 784 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 XRCC4Q13426 336 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 KYNUQ16719 465 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 SUPT20HL1Q3ZLR7 823 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 C2CD6Q53TS8 623 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 TMEM270Q6UE05 265 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 FAM84AQ96KN4 292 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 HEMGNQ9BXL5 484 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 OSBPL8Q9BZF1 889 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 PORCNQ9H237 461 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 R3HDM2Q9Y2K5 976 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 GNA15P30679 374 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 NAMPTP43490 491 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 WNT7BP56706 349 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 TRIP13Q15645 432 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 CCDC38Q502W7 563 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 SPOPLQ6IQ16 392 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 ZNF365Q70YC5 407 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 SCYL3Q8IZE3 742 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 FUKQ8N0W3 1084 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 RBAKQ9NYW8 714 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 PARP14Q460N5 1801 aa17.04■□□□□ 0.32
CHMP1A-202ENST00000535997 THAP12O43422 761 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 DNAJC8O75937 253 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 CETN2P41208 172 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 LMNB2Q03252 620 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 EN1Q05925 392 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 C12orf42Q96LP6 360 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 ELAC2Q9BQ52 826 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 C11orf70Q9BRQ4 267 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 DHX33Q9H6R0 707 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 PARVAQ9NVD7 372 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 TMEM120BA0PK00 339 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 TLR3O15455 904 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 ATG7O95352 703 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 PTPRAP18433 802 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 ARL2P36404 184 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 IFNAR2P48551 515 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 CEP128Q6ZU80 1094 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 TMEM143Q96AN5 459 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 CCDC77Q9BR77 488 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 TEX13BQ9BXU2 312 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 FOXP3Q9BZS1 431 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 PDGFDQ9GZP0 370 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 ACAD9Q9H845 621 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 APOBEC3GQ9HC16 384 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 A1CFQ9NQ94 594 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 PTPRJQ12913 1337 aa17.03■□□□□ 0.32
CHMP1A-202ENST00000535997 A0A0B4J269 797 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 C19orf81C9J6K1 198 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 GSTA1P08263 222 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 CFHP08603 1231 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 CLTAP09496 248 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 ATP4AP20648 1035 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 GLRA2P23416 452 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 RXRBP28702 533 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 TAS2R40P59535 323 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 DEPTORQ8TB45 409 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 FEZF2Q8TBJ5 459 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 DYDC1Q8WWB3 177 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 SGSM3Q96HU1 749 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 MSTO1Q9BUK6 570 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms