RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 CD302Q8IX05 232 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 SLC43A3Q8NBI5 491 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 PPM1EQ8WY54 764 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 SNX27Q96L92 541 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 FDXACB1Q9BRP7 624 aaPredicted RBP8.58□□□□□ -1.04
COL21A1-212ENST00000535941 PLEKHA5Q9HAU0 1116 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 TRPC6Q9Y210 931 aa8.58□□□□□ -1.04
COL21A1-212ENST00000535941 MROH7Q68CQ1 1323 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 TACC1O75410 805 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 PALMO75781 387 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 CLSTN1O94985 981 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 NPTXRO95502 500 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 AKR1A1P14550 325 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 DARSP14868 501 aaKnown RBP8.57□□□□□ -1.04
COL21A1-212ENST00000535941 CTNNA2P26232 953 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 RPL34P49207 117 aaKnown RBP8.57□□□□□ -1.04
COL21A1-212ENST00000535941 BIRC2Q13490 618 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 MMS19Q96T76 1030 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 ARHGAP39Q9C0H5 1083 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 GABRQQ9UN88 632 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 VWA8A3KMH1 1905 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 GRIN2DO15399 1336 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 MMEP08473 750 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 TCP1P17987 556 aaKnown RBP8.57□□□□□ -1.04
COL21A1-212ENST00000535941 ATICP31939 592 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 PRAMEF19Q5SWL8 479 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 RPUSD2Q8IZ73 545 aaKnown RBP8.57□□□□□ -1.04
COL21A1-212ENST00000535941 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
COL21A1-212ENST00000535941 C1orf127Q8N9H9 656 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 COG1Q8WTW3 980 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 SEC14L1Q92503 715 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 SGSM3Q96HU1 749 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 VCPIP1Q96JH7 1222 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 CREBZFQ9NS37 354 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 DONSONQ9NYP3 566 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 SUFUQ9UMX1 484 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 HYOU1Q9Y4L1 999 aa8.57□□□□□ -1.04
COL21A1-212ENST00000535941 ZNF638Q14966 1978 aaKnown RBP8.57□□□□□ -1.04
COL21A1-212ENST00000535941 ZEB2O60315 1214 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 URI1O94763 535 aaPredicted RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 PEX5P50542 639 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 NOP14P78316 857 aaKnown RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SMC1AQ14683 1233 aaKnown RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 KIAA0753Q2KHM9 967 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 ACAD10Q6JQN1 1059 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 TMEM40Q8WWA1 233 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 FAM84AQ96KN4 292 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 KATNAL1Q9BW62 490 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 THAP2Q9H0W7 228 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 LUC7LQ9NQ29 371 aaKnown RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 GTF2IRD1Q9UHL9 959 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 GTF3C4Q9UKN8 822 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 PCDHB2Q9Y5E7 798 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 MICAL3Q7RTP6 2002 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 CYP26A1O43174 497 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SEC31AO94979 1220 aaKnown RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 H2AFZP0C0S5 128 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 KCNE1P15382 129 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 NOMO3P69849 1222 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 NCOA4Q13772 614 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 TDRD12Q587J7 1177 aaKnown RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 H2AFVQ71UI9 128 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 RHOT2Q8IXI1 618 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SLC35G2Q8TBE7 412 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 LENG1Q96BZ8 264 aaPredicted RBP8.56□□□□□ -1.04
COL21A1-212ENST00000535941 RPS6KC1Q96S38 1066 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SDCBP2Q9H190 292 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SEPT4O43236 478 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 KIF4AO95239 1232 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 VTNP04004 478 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SRGAP2CP0DJJ0 459 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 ACTN2P35609 894 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 GABRB2P47870 512 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 FCGRTP55899 365 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 SGSM1Q2NKQ1 1148 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 TRIM72Q6ZMU5 477 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 CEP120Q8N960 986 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 GOLGA1Q92805 767 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 CCDC127Q96BQ5 260 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 BICD1Q96G01 975 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 PI4K2AQ9BTU6 479 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 MTMR12Q9C0I1 747 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 NME7Q9Y5B8 376 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 PCNTO95613 3336 aa8.56□□□□□ -1.04
COL21A1-212ENST00000535941 MACROD2A1Z1Q3 448 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 LACTBL1A8MY62 500 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 ENC1O14682 589 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 KIF1CO43896 1103 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 NFICP08651 508 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 STAG3L1P0CL83 205 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 FSCN1Q16658 493 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PKDCCQ504Y2 493 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SPOPLQ6IQ16 392 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PLEKHA7Q6IQ23 1121 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PPP1R2P3Q6NXS1 205 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms