RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 ZNF277Q9NRM2 450 aaPredicted RBP19.87■□□□□ 0.77
CHPF-203ENST00000535926 PNMA3Q9UL41 463 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 HLA-DRAP01903 254 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 C4BPAP04003 597 aaKnown RBP19.87■□□□□ 0.77
CHPF-203ENST00000535926 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
CHPF-203ENST00000535926 GJC1P36383 396 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 PTP4A2Q12974 167 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 NEDD9Q14511 834 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 SCARA3Q6AZY7 606 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 SWSAP1Q6NVH7 229 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 GLIS1Q8NBF1 620 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 ECT2Q9H8V3 914 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 PRKAG3Q9UGI9 489 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 USTQ9Y2C2 406 aa19.87■□□□□ 0.77
CHPF-203ENST00000535926 SUN1O94901 812 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 VNN1O95497 513 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 TNNI1P19237 187 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 ACOT2P49753 483 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 ZACNQ401N2 412 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 IZUMO3Q5VZ72 239 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 ZNF365Q70YC5 407 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 SPATA21Q7Z572 469 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 ZNF677Q86XU0 584 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 TGS1Q96RS0 853 aaKnown RBP19.86■□□□□ 0.77
CHPF-203ENST00000535926 C17orf75Q9HAS0 396 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 APOBEC3GQ9HC16 384 aaKnown RBP19.86■□□□□ 0.77
CHPF-203ENST00000535926 MAP3K20Q9NYL2 800 aaKnown RBP19.86■□□□□ 0.77
CHPF-203ENST00000535926 LGALS13Q9UHV8 139 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 BRWD3Q6RI45 1802 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 KLRC2P26717 231 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 HSPA1LP34931 641 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 NLRP11P59045 1033 aaKnown RBP19.86■□□□□ 0.77
CHPF-203ENST00000535926 CLDN10P78369 228 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 SP4Q02446 784 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 MGAT5Q09328 741 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 BNIP1Q12981 228 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 BAATQ14032 418 aaPredicted RBP19.86■□□□□ 0.77
CHPF-203ENST00000535926 NLRX1Q86UT6 975 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 RHOT1Q8IXI2 618 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 LARGE2Q8N3Y3 721 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 RMDN2Q96LZ7 410 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 KLHL11Q9NVR0 708 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 EURLQ9NYK6 297 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 ADAM22Q9P0K1 906 aa19.86■□□□□ 0.77
CHPF-203ENST00000535926 CFAP73A6NFT4 308 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 NQO1P15559 274 aaKnown RBP19.85■□□□□ 0.77
CHPF-203ENST00000535926 TCF4P15884 667 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 VSIG10LQ86VR7 867 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 HAPLN2Q9GZV7 340 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 COL4A5P29400 1685 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 HGSO14964 777 aaPredicted RBP19.85■□□□□ 0.77
CHPF-203ENST00000535926 CDH16O75309 829 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 RGS20O76081 388 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 FOXN2P32314 431 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 SLC8A1P32418 973 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 ZNF268Q14587 947 aaPredicted RBP19.85■□□□□ 0.77
CHPF-203ENST00000535926 ACCSLQ4AC99 568 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 WDR44Q5JSH3 913 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 KIF2BQ8N4N8 673 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 CCDC89Q8N998 374 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 LPAR1Q92633 364 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 TRIM11Q96F44 468 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 ARHGAP28Q9P2N2 729 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 ARL2BPQ9Y2Y0 163 aa19.85■□□□□ 0.77
CHPF-203ENST00000535926 WNT10BO00744 389 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 PSTPIP1O43586 416 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 EXTL3O43909 919 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 KRT10P13645 584 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 STX2P32856 288 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 SSR1P43307 286 aaKnown RBP19.84■□□□□ 0.77
CHPF-203ENST00000535926 NOMO3P69849 1222 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 P3H1Q32P28 736 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 CYP4F22Q6NT55 531 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 TMEM270Q6UE05 265 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 KATNAL2Q8IYT4 538 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 RBM15Q96T37 977 aaKnown RBP eCLIP19.84■□□□□ 0.777e-7■■■■■ 30.4
CHPF-203ENST00000535926 FHDC1Q9C0D6 1143 aaPredicted RBP19.84■□□□□ 0.77
CHPF-203ENST00000535926 KIAA1683Q9H0B3 1180 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 L3MBTL1Q9Y468 752 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 ZNF541Q9H0D2 1346 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 PI4K2BG5E9Z4 385 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 IGF2BP3O00425 579 aaKnown RBP eCLIP19.84■□□□□ 0.773e-16■■□□□ 11.8
CHPF-203ENST00000535926 NR3C2P08235 984 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 ZSCAN5DPP0CG00 497 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 COPS2P61201 443 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 RIPK1Q13546 671 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 CRELD2Q6UXH1 353 aaPredicted RBP19.84■□□□□ 0.77
CHPF-203ENST00000535926 CCDC60Q8IWA6 550 aaPredicted RBP19.84■□□□□ 0.77
CHPF-203ENST00000535926 ABRAQ8N0Z2 381 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 ANKLE1Q8NAG6 615 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 MAML1Q92585 1016 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 ZBTB45Q96K62 511 aaPredicted RBP19.84■□□□□ 0.77
CHPF-203ENST00000535926 FNBP1Q96RU3 617 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 SENP7Q9BQF6 1050 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 TRIM33Q9UPN9 1127 aa19.84■□□□□ 0.77
CHPF-203ENST00000535926 TLR3O15455 904 aaKnown RBP19.83■□□□□ 0.77
CHPF-203ENST00000535926 GCAP28676 217 aa19.83■□□□□ 0.77
CHPF-203ENST00000535926 MAGEA4P43358 317 aa19.83■□□□□ 0.77
CHPF-203ENST00000535926 ALDH5A1P51649 535 aaPredicted RBP19.83■□□□□ 0.77
CHPF-203ENST00000535926 WDR4P57081 412 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms