RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CHMP6Q96FZ7 201 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 DDX27Q96GQ7 796 aaKnown RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 SNF8Q96H20 258 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 HERPUD2Q9BSE4 406 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 TMEM109Q9BVC6 243 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 HEMGNQ9BXL5 484 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 STMN4Q9H169 189 aaPredicted RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 CDC42EP4Q9H3Q1 356 aaKnown RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 APOBEC3GQ9HC16 384 aaKnown RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 ADAM22Q9P0K1 906 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 FBXO40Q9UH90 709 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 C5orf60A6NFR6 353 aa14□□□□□ -0.17
LDLR-203ENST00000535915 PROSCO94903 275 aa14□□□□□ -0.17
LDLR-203ENST00000535915 FSBPO95073 299 aa14□□□□□ -0.17
LDLR-203ENST00000535915 ACSL3O95573 720 aa14□□□□□ -0.17
LDLR-203ENST00000535915 LDHAP00338 332 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 HARSP12081 509 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 ITIH2P19823 946 aa14□□□□□ -0.17
LDLR-203ENST00000535915 MAN1A1P33908 653 aa14□□□□□ -0.17
LDLR-203ENST00000535915 GKAP1Q5VSY0 366 aaPredicted RBP14□□□□□ -0.17
LDLR-203ENST00000535915 FBXW10Q5XX13 1052 aa14□□□□□ -0.17
LDLR-203ENST00000535915 CCDC121Q6ZUS5 278 aa14□□□□□ -0.17
LDLR-203ENST00000535915 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 GRK7Q8WTQ7 553 aa14□□□□□ -0.17
LDLR-203ENST00000535915 DDX23Q9BUQ8 820 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 DCLK3Q9C098 648 aa14□□□□□ -0.17
LDLR-203ENST00000535915 ADAM7Q9H2U9 754 aa14□□□□□ -0.17
LDLR-203ENST00000535915 DHX33Q9H6R0 707 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 HOXC10Q9NYD6 342 aa14□□□□□ -0.17
LDLR-203ENST00000535915 SPDYE16A6NNV3 312 aaPredicted RBP14□□□□□ -0.17
LDLR-203ENST00000535915 TP73O15350 636 aa14□□□□□ -0.17
LDLR-203ENST00000535915 GAS8O95995 478 aa14□□□□□ -0.17
LDLR-203ENST00000535915 RALAP11233 206 aa14□□□□□ -0.17
LDLR-203ENST00000535915 SSR1P43307 286 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 TRIM72Q6ZMU5 477 aa14□□□□□ -0.17
LDLR-203ENST00000535915 ABRAQ8N0Z2 381 aa14□□□□□ -0.17
LDLR-203ENST00000535915 GADD45GIP1Q8TAE8 222 aaPredicted RBP14□□□□□ -0.17
LDLR-203ENST00000535915 MRPL47Q9HD33 250 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 USTQ9Y2C2 406 aa14□□□□□ -0.17
LDLR-203ENST00000535915 UMODL1Q5DID0 1318 aa14□□□□□ -0.17
LDLR-203ENST00000535915 POLR2AP24928 1970 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 LOC285556D6RIA3 1793 aa14□□□□□ -0.17
LDLR-203ENST00000535915 O00370 1275 aa14□□□□□ -0.17
LDLR-203ENST00000535915 THAP12O43422 761 aa14□□□□□ -0.17
LDLR-203ENST00000535915 PIGRP01833 764 aa14□□□□□ -0.17
LDLR-203ENST00000535915 DRD4P21917 467 aa14□□□□□ -0.17
LDLR-203ENST00000535915 GJC1P36383 396 aa14□□□□□ -0.17
LDLR-203ENST00000535915 NOMO3P69849 1222 aa14□□□□□ -0.17
LDLR-203ENST00000535915 CNTN2Q02246 1040 aa14□□□□□ -0.17
LDLR-203ENST00000535915 FSTL1Q12841 308 aa14□□□□□ -0.17
LDLR-203ENST00000535915 AUHQ13825 339 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 PTK6Q13882 451 aa14□□□□□ -0.17
LDLR-203ENST00000535915 SEZ6Q53EL9 994 aa14□□□□□ -0.17
LDLR-203ENST00000535915 SYDE1Q6ZW31 735 aaPredicted RBP14□□□□□ -0.17
LDLR-203ENST00000535915 ANKRD35Q8N283 1001 aa14□□□□□ -0.17
LDLR-203ENST00000535915 RBBP8NLQ8NC74 664 aaPredicted RBP14□□□□□ -0.17
LDLR-203ENST00000535915 AAASQ9NRG9 546 aa14□□□□□ -0.17
LDLR-203ENST00000535915 INTS9Q9NV88 658 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 R3HDM2Q9Y2K5 976 aaKnown RBP14□□□□□ -0.17
LDLR-203ENST00000535915 GOLGA6L7A0A1B0GV03 622 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ATG7O95352 703 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 CLTAP09496 248 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 CHKAP35790 457 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ARL2P36404 184 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ADCY8P40145 1251 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 BAG6P46379 1132 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 VPS41P49754 854 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ITGA8P53708 1063 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 NOP14P78316 857 aaKnown RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 LONRF1Q17RB8 773 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 CCDC38Q502W7 563 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 MMS22LQ6ZRQ5 1243 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 TAOK1Q7L7X3 1001 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 RHOT1Q8IXI2 618 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 OR5B17Q8NGF7 314 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ATL2Q8NHH9 583 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 SCLT1Q96NL6 688 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 CGRRF1Q99675 332 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 WDR90Q96KV7 1748 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 A0A0B4J269 797 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 PSTPIP1O43586 416 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 EDN1P05305 212 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ATF2P15336 505 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 TBXAS1P24557 533 aaPredicted RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 MAMLD1Q13495 774 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 APOBEC3FQ8IUX4 373 aaKnown RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 ROPN1BQ9BZX4 212 aaPredicted RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 ROPN1Q9HAT0 212 aaPredicted RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 DNAJC17Q9NVM6 304 aaKnown RBP13.99□□□□□ -0.17
LDLR-203ENST00000535915 CEP83Q9Y592 693 aa13.99□□□□□ -0.17
LDLR-203ENST00000535915 TLR3O15455 904 aaKnown RBP13.98□□□□□ -0.17
LDLR-203ENST00000535915 ICAM3P32942 547 aa13.98□□□□□ -0.17
LDLR-203ENST00000535915 TAS2R40P59535 323 aa13.98□□□□□ -0.17
LDLR-203ENST00000535915 PTP4A2Q12974 167 aa13.98□□□□□ -0.17
LDLR-203ENST00000535915 PRKG1Q13976 671 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms