RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 NSFP46459 744 aaKnown RBP14.27□□□□□ -0.12
VPS33B-202ENST00000535906 MAPK6Q16659 721 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 TTC27Q6P3X3 843 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 MON1BQ7L1V2 547 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 ZC3H15Q8WU90 426 aaKnown RBP14.27□□□□□ -0.12
VPS33B-202ENST00000535906 FAM212AQ96EL1 285 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 MTMR12Q9C0I1 747 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 RAB17Q9H0T7 212 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 MROH8Q9H579 483 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 AVENQ9NQS1 362 aaPredicted RBP14.27□□□□□ -0.12
VPS33B-202ENST00000535906 CNTN6Q9UQ52 1028 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 GAS2O43903 313 aaKnown RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 HSPA6P17066 643 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 TBXAS1P24557 533 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 PTGIRP43119 386 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 RWDD2BP57060 319 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 DHX34Q14147 1143 aaKnown RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 LLGL1Q15334 1064 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 TMC3Q7Z5M5 1100 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 SLC13A5Q86YT5 568 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 JAMLQ86YT9 394 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 ABRAQ8N0Z2 381 aa14.27□□□□□ -0.13
VPS33B-202ENST00000535906 RBBP8NLQ8NC74 664 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 MAGOHBQ96A72 148 aaKnown RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-202ENST00000535906 OGTO15294 1046 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 CHRNA3P32297 505 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 LSP1P33241 339 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 NOMO3P69849 1222 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 MCL1Q07820 350 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 SIX1Q15475 284 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 WDR49Q8IV35 697 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 ZBTB8OSQ8IWT0 167 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 CPSF3Q9UKF6 684 aaKnown RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 EVPLQ92817 2033 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 FAM187AA6NFU0 413 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 B4GALT5O43286 388 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 ASS1P00966 412 aaKnown RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 MYBL1P10243 752 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 CLCN3P51790 818 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 GUCY1A3Q02108 690 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 ZNF844Q08AG5 666 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 GJC2Q5T442 439 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 CCDC137Q6PK04 289 aaKnown RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 RUFY4Q6ZNE9 571 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 CDR2LQ86X02 465 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 OR2W6PQ8NHA6 318 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 UBLCP1Q8WVY7 318 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 NLRP4Q96MN2 994 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 C11orf70Q9BRQ4 267 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 EPN3Q9H201 632 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 RNPEPQ9H4A4 650 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 RABEP2Q9H5N1 569 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS33B-202ENST00000535906 PCYOX1Q9UHG3 505 aa14.26□□□□□ -0.13
VPS33B-202ENST00000535906 NDUFAB1O14561 156 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 RARAP10276 462 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 MDH1P40925 334 aaKnown RBP14.25□□□□□ -0.13
VPS33B-202ENST00000535906 MYL6P60660 151 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 EAPPQ56P03 285 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-202ENST00000535906 DAB2IPQ5VWQ8 1189 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 EFCAB12Q6NXP0 572 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 EXOC8Q8IYI6 725 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 ARFGAP2Q8N6H7 521 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 TRIM11Q96F44 468 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 IMPG2Q9BZV3 1241 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 MINDY3Q9H8M7 445 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 PTPRHQ9HD43 1115 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 ZDHHC18Q9NUE0 388 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 SNX24Q9Y343 169 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 ANKRD65E5RJM6 399 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 MYO1FO00160 1098 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 THAP12O43422 761 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 PROZP22891 400 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 SLC26A2P50443 739 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 OSTNP61366 133 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 DHX9Q08211 1270 aaKnown RBP14.25□□□□□ -0.13
VPS33B-202ENST00000535906 GRM1Q13255 1194 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 TTLL4Q14679 1199 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 CYP1B1Q16678 543 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 ARMCX2Q7L311 632 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 THNSL1Q8IYQ7 743 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 UBR7Q8N806 425 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 CEP120Q8N960 986 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 FMO2Q99518 471 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 C2orf40Q9H1Z8 148 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 ADAM22Q9P0K1 906 aa14.25□□□□□ -0.13
VPS33B-202ENST00000535906 SRRM3A6NNA2 597 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-202ENST00000535906 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 HBP1O60381 514 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 IQCF3P0C7M6 154 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 ZNF132P52740 706 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 AP3M2P53677 418 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 SNAPC2Q13487 334 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms