RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 IKZF4Q9H2S9 585 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 ASB7Q9H672 318 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 RPF1Q9H9Y2 349 aaKnown RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 TOPORSQ9NS56 1045 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 TAB2Q9NYJ8 693 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 CPSF3Q9UKF6 684 aaKnown RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 PIN4Q9Y237 131 aaKnown RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 DAAM1Q9Y4D1 1078 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 PCDHGC5Q9Y5F6 944 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 ITIH6Q6UXX5 1313 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ZNF623O75123 536 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 CSDE1O75534 798 aaKnown RBP11.66□□□□□ -0.54
UBE3B-205ENST00000535900 FGF18O76093 207 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ADRB2P07550 413 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 SRGAP2BP0DMP2 458 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 YARSP54577 528 aaKnown RBP11.66□□□□□ -0.54
UBE3B-205ENST00000535900 UBXN1Q04323 297 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ADAM15Q13444 863 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 TRIM14Q14142 442 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 MIIPQ5JXC2 388 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 PLPP4Q5VZY2 271 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 EEF1DP3Q658K8 133 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 CRELD2Q6UXH1 353 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ZBTB33Q86T24 672 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 CBWD2Q8IUF1 395 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 RNF169Q8NCN4 708 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 SAAL1Q96ER3 474 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ACAP3Q96P50 834 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 NUP58Q9BVL2 599 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 HAPLN2Q9GZV7 340 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 VPS16Q9H269 839 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ELAC1Q9H777 363 aaKnown RBP11.66□□□□□ -0.54
UBE3B-205ENST00000535900 TLE6Q9H808 572 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 ENTPD7Q9NQZ7 604 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 DERAQ9Y315 318 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 MYO7AQ13402 2215 aa11.66□□□□□ -0.54
UBE3B-205ENST00000535900 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
UBE3B-205ENST00000535900 GLP2RO95838 553 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 ACOT2P49753 483 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 DSC3Q14574 896 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 DCAF17Q5H9S7 520 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-205ENST00000535900 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 TWF2Q6IBS0 349 aaKnown RBP11.65□□□□□ -0.54
UBE3B-205ENST00000535900 WDR49Q8IV35 697 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 VSTM4Q8IW00 320 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 RDH13Q8NBN7 331 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 SMRP1Q8NCR6 262 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 CACTINQ8WUQ7 758 aaKnown RBP11.65□□□□□ -0.54
UBE3B-205ENST00000535900 CPB2Q96IY4 423 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 MSLNLQ96KJ4 702 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 NAP1L5Q96NT1 182 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-205ENST00000535900 TMEM8AQ9HCN3 771 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 MUTYHQ9UIF7 546 aa11.65□□□□□ -0.54
UBE3B-205ENST00000535900 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.65□□□□□ -0.54
UBE3B-205ENST00000535900 CITO14578 2027 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 A0A0U1RQF3 1178 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 NPTXRO95502 500 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 TPM1P09493 284 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 FGFR4P22455 802 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 CA8P35219 290 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 PPM1AP35813 382 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 PBX1P40424 430 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 FMO5P49326 533 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 FIGNQ5HY92 759 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 KRT39Q6A163 491 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 GBP6Q6ZN66 633 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
UBE3B-205ENST00000535900 CCDC150Q8NCX0 1101 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 FAM81BQ96LP2 452 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-205ENST00000535900 CGRRF1Q99675 332 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 CLEC1BQ9P126 229 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 PUF60Q9UHX1 559 aaKnown RBP11.64□□□□□ -0.55
UBE3B-205ENST00000535900 USP20Q9Y2K6 914 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 COQ4Q9Y3A0 265 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 C2CD2Q9Y426 696 aa11.64□□□□□ -0.55
UBE3B-205ENST00000535900 USP15Q9Y4E8 981 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-205ENST00000535900 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 PER2O15055 1255 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 XPOTO43592 962 aaKnown RBP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 ZC3H11AO75152 810 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 EOMESO95936 686 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 HARSP12081 509 aaKnown RBP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 TNNI1P19237 187 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms