RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 RALGAPA1Q6GYQ0 2036 aa8.81□□□□□ -1
CHFR-211ENST00000535897 PDCD11Q14690 1871 aaKnown RBP8.81□□□□□ -1
CHFR-211ENST00000535897 COL4A2P08572 1712 aa8.81□□□□□ -1
CHFR-211ENST00000535897 SHISA7A6NL88 538 aa8.81□□□□□ -1
CHFR-211ENST00000535897 SLC38A8A6NNN8 435 aa8.81□□□□□ -1
CHFR-211ENST00000535897 CCDC169A6NNP5 214 aa8.81□□□□□ -1
CHFR-211ENST00000535897 CHURC1-FNTBB4DL54 471 aa8.81□□□□□ -1
CHFR-211ENST00000535897 SLC30A4O14863 429 aa8.81□□□□□ -1
CHFR-211ENST00000535897 SYN3O14994 580 aa8.81□□□□□ -1
CHFR-211ENST00000535897 EPB41L2O43491 1005 aaKnown RBP8.81□□□□□ -1
CHFR-211ENST00000535897 LRP3O75074 770 aa8.81□□□□□ -1
CHFR-211ENST00000535897 MICAL2O94851 1124 aa8.81□□□□□ -1
CHFR-211ENST00000535897 SEC24AO95486 1093 aa8.81□□□□□ -1
CHFR-211ENST00000535897 TDGF1P13385 188 aa8.81□□□□□ -1
CHFR-211ENST00000535897 GJA1P17302 382 aa8.81□□□□□ -1
CHFR-211ENST00000535897 CCR2P41597 374 aa8.81□□□□□ -1
CHFR-211ENST00000535897 FNTBP49356 437 aa8.81□□□□□ -1
CHFR-211ENST00000535897 TWF1Q12792 350 aa8.81□□□□□ -1
CHFR-211ENST00000535897 SRSF5Q13243 272 aaKnown RBP8.81□□□□□ -1
CHFR-211ENST00000535897 ANKRD1Q15327 319 aa8.81□□□□□ -1
CHFR-211ENST00000535897 TEAD2Q15562 447 aa8.81□□□□□ -1
CHFR-211ENST00000535897 NT5DC1Q5TFE4 455 aa8.81□□□□□ -1
CHFR-211ENST00000535897 TPGS2Q68CL5 300 aa8.81□□□□□ -1
CHFR-211ENST00000535897 ZNF280DQ6N043 979 aa8.81□□□□□ -1
CHFR-211ENST00000535897 POTEHQ6S545 545 aa8.81□□□□□ -1
CHFR-211ENST00000535897 CD300LGQ6UXG3 332 aa8.81□□□□□ -1
CHFR-211ENST00000535897 PRR23CQ6ZRP0 262 aa8.81□□□□□ -1
CHFR-211ENST00000535897 CEP68Q76N32 757 aa8.81□□□□□ -1
CHFR-211ENST00000535897 MAP4K3Q8IVH8 894 aa8.81□□□□□ -1
CHFR-211ENST00000535897 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
CHFR-211ENST00000535897 KIFAP3Q92845 792 aa8.81□□□□□ -1
CHFR-211ENST00000535897 ZSWIM3Q96MP5 696 aa8.81□□□□□ -1
CHFR-211ENST00000535897 POLR3CQ9BUI4 534 aaPredicted RBP8.81□□□□□ -1
CHFR-211ENST00000535897 TMEM60Q9H2L4 133 aa8.81□□□□□ -1
CHFR-211ENST00000535897 FBXL5Q9UKA1 691 aa8.81□□□□□ -1
CHFR-211ENST00000535897 TNFSF13BQ9Y275 285 aa8.81□□□□□ -1
CHFR-211ENST00000535897 CFAP47Q6ZTR5 3102 aa8.8□□□□□ -1
CHFR-211ENST00000535897 HEPACAM2A8MVW5 462 aa8.8□□□□□ -1
CHFR-211ENST00000535897 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
CHFR-211ENST00000535897 OR52Z1P0C646 297 aa8.8□□□□□ -1
CHFR-211ENST00000535897 FDPSP14324 419 aaKnown RBP8.8□□□□□ -1
CHFR-211ENST00000535897 RPA1P27694 616 aa8.8□□□□□ -1
CHFR-211ENST00000535897 MARCKSP29966 332 aaPredicted RBP8.8□□□□□ -1
CHFR-211ENST00000535897 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
CHFR-211ENST00000535897 GRM5P41594 1212 aa8.8□□□□□ -1
CHFR-211ENST00000535897 DMWDQ09019 674 aa8.8□□□□□ -1
CHFR-211ENST00000535897 SAFBQ15424 915 aaKnown RBP eCLIP8.8□□□□□ -1
CHFR-211ENST00000535897 CSRP2Q16527 193 aa8.8□□□□□ -1
CHFR-211ENST00000535897 AASDHQ4L235 1098 aaPredicted RBP8.8□□□□□ -1
CHFR-211ENST00000535897 HAUS3Q68CZ6 603 aa8.8□□□□□ -1
CHFR-211ENST00000535897 IL31Q6EBC2 164 aa8.8□□□□□ -1
CHFR-211ENST00000535897 MAMSTRQ6ZN01 415 aa8.8□□□□□ -1
CHFR-211ENST00000535897 LONP2Q86WA8 852 aa8.8□□□□□ -1
CHFR-211ENST00000535897 MFSD6LQ8IWD5 586 aa8.8□□□□□ -1
CHFR-211ENST00000535897 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
CHFR-211ENST00000535897 SPEM1Q8N4L4 309 aa8.8□□□□□ -1
CHFR-211ENST00000535897 LEMD2Q8NC56 503 aa8.8□□□□□ -1
CHFR-211ENST00000535897 APPL2Q8NEU8 664 aa8.8□□□□□ -1
CHFR-211ENST00000535897 TTC8Q8TAM2 541 aa8.8□□□□□ -1
CHFR-211ENST00000535897 C18orf25Q96B23 403 aaPredicted RBP8.8□□□□□ -1
CHFR-211ENST00000535897 ACAP3Q96P50 834 aa8.8□□□□□ -1
CHFR-211ENST00000535897 MRPL4Q9BYD3 311 aaKnown RBP8.8□□□□□ -1
CHFR-211ENST00000535897 CDT1Q9H211 546 aa8.8□□□□□ -1
CHFR-211ENST00000535897 BHMT2Q9H2M3 363 aa8.8□□□□□ -1
CHFR-211ENST00000535897 TRPV5Q9NQA5 729 aa8.8□□□□□ -1
CHFR-211ENST00000535897 RBM12Q9NTZ6 932 aaKnown RBP8.8□□□□□ -1
CHFR-211ENST00000535897 CEP72Q9P209 647 aa8.8□□□□□ -1
CHFR-211ENST00000535897 AFF4Q9UHB7 1163 aaKnown RBP8.8□□□□□ -1
CHFR-211ENST00000535897 PHLPP2Q6ZVD8 1323 aa8.8□□□□□ -1
CHFR-211ENST00000535897 CNOT1A5YKK6 2376 aaKnown RBP8.79□□□□□ -1
CHFR-211ENST00000535897 A0A1W2PRU2 124 aa8.79□□□□□ -1
CHFR-211ENST00000535897 DPYSL4O14531 572 aa8.79□□□□□ -1
CHFR-211ENST00000535897 HRO43593 1189 aa8.79□□□□□ -1
CHFR-211ENST00000535897 GDF9O60383 454 aa8.79□□□□□ -1
CHFR-211ENST00000535897 FOXD2O60548 495 aaPredicted RBP8.79□□□□□ -1
CHFR-211ENST00000535897 JAK2O60674 1132 aa8.79□□□□□ -1
CHFR-211ENST00000535897 CHRNB1P11230 501 aa8.79□□□□□ -1
CHFR-211ENST00000535897 RPL9P32969 192 aaKnown RBP8.79□□□□□ -1
CHFR-211ENST00000535897 CNR2P34972 360 aa8.79□□□□□ -1
CHFR-211ENST00000535897 SOX9P48436 509 aa8.79□□□□□ -1
CHFR-211ENST00000535897 PEX3P56589 373 aa8.79□□□□□ -1
CHFR-211ENST00000535897 GUCY1B3Q02153 619 aa8.79□□□□□ -1
CHFR-211ENST00000535897 DMP1Q13316 513 aaPredicted RBP8.79□□□□□ -1
CHFR-211ENST00000535897 ZNF174Q15697 407 aa8.79□□□□□ -1
CHFR-211ENST00000535897 C1orf228Q6PIY5 440 aa8.79□□□□□ -1
CHFR-211ENST00000535897 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
CHFR-211ENST00000535897 Q6ZS52 159 aa8.79□□□□□ -1
CHFR-211ENST00000535897 HAUS6Q7Z4H7 955 aa8.79□□□□□ -1
CHFR-211ENST00000535897 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
CHFR-211ENST00000535897 C12orf50Q8NA57 414 aaPredicted RBP8.79□□□□□ -1
CHFR-211ENST00000535897 DDX1Q92499 740 aaKnown RBP8.79□□□□□ -1
CHFR-211ENST00000535897 DDX12PQ92771 950 aa8.79□□□□□ -1
CHFR-211ENST00000535897 GTF3C6Q969F1 213 aa8.79□□□□□ -1
CHFR-211ENST00000535897 E2F7Q96AV8 911 aa8.79□□□□□ -1
CHFR-211ENST00000535897 MSANTD3Q96H12 275 aa8.79□□□□□ -1
CHFR-211ENST00000535897 ZMAT2Q96NC0 199 aaKnown RBP8.79□□□□□ -1
CHFR-211ENST00000535897 TBC1D32Q96NH3 1257 aa8.79□□□□□ -1
CHFR-211ENST00000535897 PGLYRP2Q96PD5 576 aa8.79□□□□□ -1
CHFR-211ENST00000535897 ACO2Q99798 780 aaKnown RBP8.79□□□□□ -1
CHFR-211ENST00000535897 TARS2Q9BW92 718 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms