RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 QARSP47897 775 aaKnown RBP16.83■□□□□ 0.29
MCF2L-232ENST00000535094 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.29
MCF2L-232ENST00000535094 GBP5Q96PP8 586 aa16.83■□□□□ 0.29
MCF2L-232ENST00000535094 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.29
MCF2L-232ENST00000535094 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
MCF2L-232ENST00000535094 UBTFL6P0CB48 400 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-232ENST00000535094 SSTR1P30872 391 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
MCF2L-232ENST00000535094 CENPUQ71F23 418 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 FAM161BQ96MY7 647 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 PCSK1NQ9UHG2 260 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 ZMYM2Q9UBW7 1377 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 LRRIQ4A6NIV6 560 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 GZMAP12544 262 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 RFX1P22670 979 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 KLC1Q07866 573 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 TRAF1Q13077 416 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 DPY19L2P1Q6NXN4 242 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 LDHDQ86WU2 507 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 AGGF1Q8N302 714 aaeCLIP16.83■□□□□ 0.284e-7■■■□□ 14.7
MCF2L-232ENST00000535094 GRAMD1AQ96CP6 724 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 FAXDC2Q96IV6 333 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 EBF2Q9HAK2 575 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 HEY2Q9UBP5 337 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 USP21Q9UK80 565 aa16.83■□□□□ 0.28
MCF2L-232ENST00000535094 PECAM1P16284 738 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 KDSRQ06136 332 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 SPDYCQ5MJ68 293 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 MOXD1Q6UVY6 613 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 TRIM4Q9C037 500 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ZCWPW1Q9H0M4 648 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ARMCX1Q9P291 453 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 SCOCQ9UIL1 159 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 DNPEPQ9ULA0 475 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 AP1G2O75843 785 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ZCCHC18P0CG32 403 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 GNAT1P11488 350 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ADRA1DP25100 572 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 IRX1P78414 480 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 RIPK1Q13546 671 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 FAM13CQ8NE31 585 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 MORC4Q8TE76 937 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 CALN1Q9BXU9 219 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 RNPEPL1Q9HAU8 725 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 PPARGC1AQ9UBK2 798 aaKnown RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ADAMTSL3P82987 1691 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 EME2A4GXA9 379 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 NVLO15381 856 aaKnown RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ARFIP2P53365 341 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 MTMR1Q13613 665 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 CFAP157Q5JU67 520 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 ZNF526Q8TF50 670 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-232ENST00000535094 TEKT4Q8WW24 435 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 IWS1Q96ST2 819 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 TRIM55Q9BYV6 548 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 STOML1Q9UBI4 398 aa16.82■□□□□ 0.28
MCF2L-232ENST00000535094 CAPN9O14815 690 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 PSMD10O75832 226 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 CALB2P22676 271 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 RFC5P40937 340 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 CAV1Q03135 178 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 NBPF20Q3BBV1 942 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 C3orf62Q6ZUJ4 267 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-232ENST00000535094 SLC13A1Q9BZW2 595 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 AAASQ9NRG9 546 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-232ENST00000535094 UBR2Q8IWV8 1755 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 CYP3A4P08684 503 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 MARK3P27448 753 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 GNA15P30679 374 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 PTDSS1P48651 473 aaKnown RBP16.81■□□□□ 0.28
MCF2L-232ENST00000535094 KCNT1Q5JUK3 1230 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 MIS18BP1Q6P0N0 1132 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 SLC30A9Q6PML9 568 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 ZNF668Q96K58 619 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-232ENST00000535094 LRRC19Q9H756 370 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
MCF2L-232ENST00000535094 INHBAP08476 426 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 SKIP12755 728 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 MTERF2Q49AM1 385 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 MFSD5Q6N075 450 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 TLDC1Q6P9B6 456 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 BORCS6Q96GS4 357 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 HERPUD2Q9BSE4 406 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 CHKBQ9Y259 395 aa16.81■□□□□ 0.28
MCF2L-232ENST00000535094 IGKV6D-41A0A0C4DH26 115 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 ATP5HO75947 161 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 TAS2R40P59535 323 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 SLC1A5Q15758 541 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 DNAJC24Q6P3W2 148 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 STK32AQ8WU08 396 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 CFAP36Q96G28 342 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 RAVER2Q9HCJ3 691 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms