RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
TMEM258-202ENST00000535042 COL4A4P53420 1690 aaPredicted RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 SYCE3A1L190 88 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 SLC16A3O15427 465 aaKnown RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 CST3P01034 146 aaPredicted RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 SOD2P04179 222 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 POLR2BP30876 1174 aaKnown RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 PPP3CAQ08209 521 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 BFSP1Q12934 665 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 STX1AQ16623 288 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 TRAPPC11Q7Z392 1133 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 IRF2BP1Q8IU81 584 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 AUTS2Q8WXX7 1259 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 ANKRD36BP1Q96IX9 119 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 GAS2L1Q99501 681 aaPredicted RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 TCF25Q9BQ70 676 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 FUCA2Q9BTY2 467 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 HERC2P3Q9BVR0 1158 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 TLR9Q9NR96 1032 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 CHST7Q9NS84 486 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 ANO10Q9NW15 660 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 DACH1Q9UI36 760 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 AGAP1Q9UPQ3 857 aa14.18□□□□□ -0.14
TMEM258-202ENST00000535042 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.18□□□□□ -0.14
TMEM258-202ENST00000535042 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM258-202ENST00000535042 PDCD11Q14690 1871 aaKnown RBP14.17□□□□□ -0.14
TMEM258-202ENST00000535042 PLXNA4Q9HCM2 1894 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 HIDE1A8MVS5 230 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 TNNC2P02585 160 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 CTSAP10619 480 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 KRT13P13646 458 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM258-202ENST00000535042 LILRA4P59901 499 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 PTPROQ16827 1216 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 CT47A1Q5JQC4 288 aaPredicted RBP14.17□□□□□ -0.14
TMEM258-202ENST00000535042 RTP2Q5QGT7 225 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 TDRD10Q5VZ19 366 aaKnown RBP14.17□□□□□ -0.14
TMEM258-202ENST00000535042 PLPP4Q5VZY2 271 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 C15orf39Q6ZRI6 1047 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 SV2AQ7L0J3 742 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 MICAL1Q8TDZ2 1067 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 DNAJC25Q9H1X3 360 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 LMCD1Q9NZU5 365 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 ITGA11Q9UKX5 1188 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 NUB1Q9Y5A7 615 aa14.17□□□□□ -0.14
TMEM258-202ENST00000535042 IKBKBO14920 756 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 LILRB3O75022 631 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 VNN1O95497 513 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 CXCL14O95715 111 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 KRT19P08727 400 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 FOSL2P15408 326 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 FGFR3P22607 806 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 TKTP29401 623 aaKnown RBP14.16□□□□□ -0.14
TMEM258-202ENST00000535042 GCLMP48507 274 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 RBP5P82980 135 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 DSG1Q02413 1049 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 ENPEPQ07075 957 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 PTPN14Q15678 1187 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 ZACNQ401N2 412 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 FRMD5Q7Z6J6 570 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 CEP57Q86XR8 500 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 MRPL43Q8N983 215 aaKnown RBP14.16□□□□□ -0.14
TMEM258-202ENST00000535042 SUSD3Q96L08 255 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 ARMCX3Q9UH62 379 aaPredicted RBP14.16□□□□□ -0.14
TMEM258-202ENST00000535042 CHD7Q9P2D1 2997 aa14.16□□□□□ -0.14
TMEM258-202ENST00000535042 C2orf71A6NGG8 1288 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 M0QZQ0 153 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 C2CD2LO14523 706 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 GLUD2P49448 558 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 TAF6P49848 677 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 AP3M2P53677 418 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 MARSP56192 900 aaKnown RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 MYL6P60660 151 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 ELAVL2Q12926 359 aaKnown RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 USP41Q3LFD5 358 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 CCDC40Q4G0X9 1142 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 TCEAL5Q5H9L2 206 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 PRSS55Q6UWB4 352 aaPredicted RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 LRRC52Q8N7C0 313 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 ENOX1Q8TC92 643 aaKnown RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 SLC35C1Q96A29 364 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 ELMO3Q96BJ8 720 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 SENP8Q96LD8 212 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
TMEM258-202ENST00000535042 METTL14Q9HCE5 456 aaKnown RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 SAMSN1Q9NSI8 373 aaKnown RBP14.15□□□□□ -0.14
TMEM258-202ENST00000535042 TIMM13Q9Y5L4 95 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms