RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 PTPAQ15257 358 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
COPB1-211ENST00000534234 ZBTB41Q5SVQ8 909 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 TPGS2Q68CL5 300 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 ZNF280DQ6N043 979 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 FAM173BQ6P4H8 233 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 MTSS1LQ765P7 747 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 TMEM130Q8N3G9 435 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 KRI1Q8N9T8 703 aaKnown RBP9.7□□□□□ -0.86
COPB1-211ENST00000534234 DDX12PQ92771 950 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 MCRS1Q96EZ8 462 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 MSTO1Q9BUK6 570 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 RPF1Q9H9Y2 349 aaKnown RBP9.7□□□□□ -0.86
COPB1-211ENST00000534234 SLC2A4RGQ9NR83 387 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 CCDC39Q9UFE4 941 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 SRPRBQ9Y5M8 271 aaKnown RBP9.7□□□□□ -0.86
COPB1-211ENST00000534234 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.7□□□□□ -0.86
COPB1-211ENST00000534234 WDFY4Q6ZS81 3184 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ARHGEF37A1IGU5 675 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 M0QZQ0 153 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 XPOTO43592 962 aaKnown RBP9.69□□□□□ -0.86
COPB1-211ENST00000534234 FAM189A1O60320 539 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 SEC24AO95486 1093 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ADRB2P07550 413 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ABCD1P33897 745 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 CEBPZQ03701 1054 aaKnown RBP9.69□□□□□ -0.86
COPB1-211ENST00000534234 ADCY1Q08828 1119 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ZC2HC1CQ53FD0 456 aaPredicted RBP9.69□□□□□ -0.86
COPB1-211ENST00000534234 DYMQ7RTS9 669 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 USP37Q86T82 979 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 NPAS3Q8IXF0 933 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 DTWD2Q8NBA8 298 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ING5Q8WYH8 240 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 CLIC6Q96NY7 704 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 TSPAN18Q96SJ8 248 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 FIZ1Q96SL8 496 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 CORO1BQ9BR76 489 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 TBC1D17Q9HA65 648 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 ARHGEF3Q9NR81 526 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 FBXO2Q9UK22 296 aaPredicted RBP9.69□□□□□ -0.86
COPB1-211ENST00000534234 PCDHB8Q9UN66 801 aa9.69□□□□□ -0.86
COPB1-211ENST00000534234 TIMM13Q9Y5L4 95 aaPredicted RBP9.69□□□□□ -0.86
COPB1-211ENST00000534234 TDRD15B5MCY1 1934 aaKnown RBP9.69□□□□□ -0.86
COPB1-211ENST00000534234 OAZ2O95190 189 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 CPB1P15086 417 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 GUCY2FP51841 1108 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 YWHAHQ04917 246 aaPredicted RBP9.68□□□□□ -0.86
COPB1-211ENST00000534234 RESTQ13127 1097 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 SLC5A9Q2M3M2 681 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 PHLDB3Q6NSJ2 640 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 SLC39A4Q6P5W5 647 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 DSTYKQ6XUX3 929 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 SV2BQ7L1I2 683 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 ZNF720Q7Z2F6 126 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 MAP4K3Q8IVH8 894 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 CD302Q8IX05 232 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 CCDC105Q8IYK2 499 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 INTS4Q96HW7 963 aaKnown RBP9.68□□□□□ -0.86
COPB1-211ENST00000534234 SHDQ96IW2 340 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 ZNF512Q96ME7 567 aaPredicted RBP9.68□□□□□ -0.86
COPB1-211ENST00000534234 KXD1Q9BQD3 176 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 BACH2Q9BYV9 841 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 ST6GALNAC4Q9H4F1 302 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 AVENQ9NQS1 362 aaPredicted RBP9.68□□□□□ -0.86
COPB1-211ENST00000534234 GDE1Q9NZC3 331 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 AFF4Q9UHB7 1163 aaKnown RBP9.68□□□□□ -0.86
COPB1-211ENST00000534234 CPSF3Q9UKF6 684 aaKnown RBP9.68□□□□□ -0.86
COPB1-211ENST00000534234 MAFFQ9ULX9 164 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 SIT1Q9Y3P8 196 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 INSL5Q9Y5Q6 135 aa9.68□□□□□ -0.86
COPB1-211ENST00000534234 TISP43B9A030 160 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 PROB1E7EW31 1015 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 ZNF197O14709 1029 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 GFRA3O60609 400 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 TXLNAP40222 546 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 NBL1P41271 181 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.864e-7■□□□□ 11.3
COPB1-211ENST00000534234 ACOT2P49753 483 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 LILRA4P59901 499 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
COPB1-211ENST00000534234 ANGPT1Q15389 498 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 SLC44A4Q53GD3 710 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 CYP4A22Q5TCH4 519 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 JADE1Q6IE81 842 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 SLFN12LQ6IEE8 588 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 IQCEQ6IPM2 695 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 POTEHQ6S545 545 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 RNF19BQ6ZMZ0 732 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 SFR1Q86XK3 245 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 ELMOD1Q8N336 334 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 BEST2Q8NFU1 509 aa9.67□□□□□ -0.86
COPB1-211ENST00000534234 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms