RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.77	□□□□□ -1.49
ATM-223	ENST00000533979	SERHL2	Q9H4I8	314 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	CASS4	Q9NQ75	786 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	TMEM140	Q9NV12	185 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	USP25	Q9UHP3	1055 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	SIK3	Q9Y2K2	1263 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	FPGT-TNNI3K	V9GXZ4	949 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	ERCC6L2	Q5T890	1561 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	FAM171A2	A8MVW0	826 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	WNT10B	O00744	389 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	TBX3	O15119	743 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	TEX33	O43247	280 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.76	□□□□□ -1.49
ATM-223	ENST00000533979	ZEB1	P37275	1124 aa	Predicted RBP	5.76	□□□□□ -1.49
ATM-223	ENST00000533979	NEK3	P51956	506 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	CHN2	P52757	468 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	PICALM	Q13492	652 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	SEPT2	Q15019	361 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	ABCB5	Q2M3G0	1257 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	CRB2	Q5IJ48	1285 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	AFMID	Q63HM1	303 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	ERAP2	Q6P179	960 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	TPH2	Q8IWU9	490 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	RHOT2	Q8IXI1	618 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	AMOTL1	Q8IY63	956 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	RNF169	Q8NCN4	708 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.76	□□□□□ -1.49
ATM-223	ENST00000533979	TOR3A	Q9H497	397 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	PPCS	Q9HAB8	311 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	CYP4F11	Q9HBI6	524 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	TCF7L1	Q9HCS4	588 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	LANCL2	Q9NS86	450 aa		5.76	□□□□□ -1.49
ATM-223	ENST00000533979	LUC7L2	Q9Y383	392 aa	Known RBP	5.76	□□□□□ -1.49
ATM-223	ENST00000533979	USP15	Q9Y4E8	981 aa	Predicted RBP	5.76	□□□□□ -1.49
ATM-223	ENST00000533979	SCRIB	Q14160	1630 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	OSM	P13725	252 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	PTPN21	Q16825	1174 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	MINDY4	Q4G0A6	757 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	FAM83B	Q5T0W9	1011 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	TSHZ3	Q63HK5	1081 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	PGM2L1	Q6PCE3	622 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	MED25	Q71SY5	747 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	DRC7	Q8IY82	874 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	CBARP	Q8N350	705 aa	Predicted RBP	5.75	□□□□□ -1.49
ATM-223	ENST00000533979	FAXDC2	Q96IV6	333 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	STRBP	Q96SI9	672 aa	Known RBP	5.75	□□□□□ -1.49
ATM-223	ENST00000533979	TEX101	Q9BY14	249 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	WDR11	Q9BZH6	1224 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	REXO4	Q9GZR2	422 aa	Known RBP	5.75	□□□□□ -1.49
ATM-223	ENST00000533979	MANSC1	Q9H8J5	431 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	DMRT3	Q9NQL9	472 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.75	□□□□□ -1.49
ATM-223	ENST00000533979	DAAM1	Q9Y4D1	1078 aa		5.75	□□□□□ -1.49
ATM-223	ENST00000533979	THOC2	Q8NI27	1593 aa	Known RBP	5.75	□□□□□ -1.49
ATM-223	ENST00000533979	ANO9	A1A5B4	782 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	PIPSL	A2A3N6	862 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	LPXN	O60711	386 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	CFI	P05156	583 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	CT47B1	P0C2W7	299 aa	Predicted RBP	5.74	□□□□□ -1.49
ATM-223	ENST00000533979	ATP5J	P18859	108 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	PROZ	P22891	400 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	BDNF	P23560	247 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	SLC6A9	P48067	706 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	USP14	P54578	494 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	MXRA7	P84157	204 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	GUCY1B3	Q02153	619 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	COL10A1	Q03692	680 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	REST	Q13127	1097 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	GBX1	Q14549	363 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	KRTAP15-1	Q3LI76	137 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	SEM1	Q6ZVN7	128 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	MORC1	Q86VD1	984 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	TMEM132C	Q8N3T6	1108 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	MYRIP	Q8NFW9	859 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	BOD1	Q96IK1	185 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	COQ10A	Q96MF6	247 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	SLC2A13	Q96QE2	648 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	NEU1	Q99519	415 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	SLC13A1	Q9BZW2	595 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	KLHL11	Q9NVR0	708 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	ANKFY1	Q9P2R3	1169 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	ANAPC4	Q9UJX5	808 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	FBXO9	Q9UK97	447 aa	Predicted RBP	5.74	□□□□□ -1.49
ATM-223	ENST00000533979	DNM3	Q9UQ16	869 aa		5.74	□□□□□ -1.49
ATM-223	ENST00000533979	OVOL3	O00110	214 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	FZD9	O00144	591 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	NPHP1	O15259	732 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	TCEA3	O75764	348 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	RAP2A	P10114	183 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	CKB	P12277	381 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	PHKG2	P15735	406 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	DDX6	P26196	483 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
ATM-223	ENST00000533979	BLOC1S1	P78537	153 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	FSTL1	Q12841	308 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	SPDYE7P	Q495Y7	208 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	TMEM240	Q5SV17	173 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	ABHD17B	Q5VST6	288 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	PCGF5	Q86SE9	256 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	FAM43A	Q8N2R8	423 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	TMTC2	Q8N394	836 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms