RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
ATM-222ENST00000533733 CLDN3O15551 220 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 TRAPPC3O43617 180 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 TOM1L1O75674 476 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 UBA1P22314 1058 aaKnown RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 NOP14P78316 857 aaKnown RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 IRX5P78411 483 aaPredicted RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 SP2Q02086 613 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 SP4Q02446 784 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 CCNG2Q16589 344 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 MFSD5Q6N075 450 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 EXD1Q8NHP7 514 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 TMEM143Q96AN5 459 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 SNF8Q96H20 258 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 ADAM22Q9P0K1 906 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATM-222ENST00000533733 IP6K2Q9UHH9 426 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 ANK1P16157 1881 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 E7EVH7 732 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 RGS16O15492 202 aaPredicted RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 VNN1O95497 513 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 RRM1P23921 792 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 ZNF132P52740 706 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 COPS2P61201 443 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 MAGOHP61326 146 aaKnown RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 MCL1Q07820 350 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 NCOA4Q13772 614 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 LRRC38Q5VT99 294 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 SEPT14Q6ZU15 432 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 PLPPR4Q7Z2D5 763 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 TADA2BQ86TJ2 420 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 C10orf67Q8IYJ2 551 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 CCDC89Q8N998 374 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 RBBP8NLQ8NC74 664 aaPredicted RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 OR2W6PQ8NHA6 318 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 RBM41Q96IZ5 413 aaKnown RBP12.74□□□□□ -0.37
ATM-222ENST00000533733 PI4K2AQ9BTU6 479 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 EPB41L4BQ9H329 900 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 CSADQ9Y600 493 aa12.74□□□□□ -0.37
ATM-222ENST00000533733 ZNF541Q9H0D2 1346 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 IRF6O14896 467 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 MEFVO15553 781 aaPredicted RBP12.73□□□□□ -0.37
ATM-222ENST00000533733 RIPK2O43353 540 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 SORBS3O60504 671 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
ATM-222ENST00000533733 ASS1P00966 412 aaKnown RBP12.73□□□□□ -0.37
ATM-222ENST00000533733 ACOT2P49753 483 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 KRT17Q04695 432 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 CAPSQ13938 189 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 AADACL2Q6P093 401 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 TMEM270Q6UE05 265 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 ZDHHC14Q8IZN3 488 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 UBR7Q8N806 425 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
ATM-222ENST00000533733 BTBD6Q96KE9 485 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 TARS2Q9BW92 718 aaKnown RBP12.73□□□□□ -0.37
ATM-222ENST00000533733 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 SPATC1LQ9H0A9 340 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
ATM-222ENST00000533733 UMODL1Q5DID0 1318 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 SBF1O95248 1867 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 OGTO15294 1046 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 ASAP2O43150 1006 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 LGR5O75473 907 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 MMP13P45452 471 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 TFDP1Q14186 410 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 SLC29A2Q14542 456 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 TNFAIP8L3Q5GJ75 292 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 DRICH1Q6PGQ1 229 aaPredicted RBP12.72□□□□□ -0.37
ATM-222ENST00000533733 TAX1BP1Q86VP1 789 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 RELL1Q8IUW5 271 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 FEZF2Q8TBJ5 459 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
ATM-222ENST00000533733 CYFIP2Q96F07 1278 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 SERPINB12Q96P63 405 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 CCDC113Q9H0I3 377 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 FAM124BQ9H5Z6 455 aaPredicted RBP12.72□□□□□ -0.37
ATM-222ENST00000533733 CCDC134Q9H6E4 229 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 ANKFY1Q9P2R3 1169 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 STRIP2Q9ULQ0 834 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
ATM-222ENST00000533733 IGKV6-21A0A0C4DH24 114 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 CXCL11O14625 94 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 RASGRF2O14827 1237 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 MSCO60682 206 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 CAND2O75155 1236 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 TCEA3O75764 348 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 ATF2P15336 505 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 PTPN7P35236 360 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms