RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LARP4BQ92615 738 aaKnown RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 BORCS6Q96GS4 357 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 BCO2Q9BYV7 579 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 OSBPL6Q9BZF3 934 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 C2orf40Q9H1Z8 148 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 CXCL16Q9H2A7 254 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 KMT5AQ9NQR1 393 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 FAM13BQ9NYF5 915 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 MTF2Q9Y483 593 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
COPB1-210ENST00000533533 FAM170BA6NMN3 283 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 ACKR2O00590 384 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 LAMTOR5O43504 91 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 TBCAO75347 108 aaKnown RBP9.52□□□□□ -0.89
COPB1-210ENST00000533533 PRKCBP05771 671 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 FGFR3P22607 806 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 OR1D2P34982 312 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 DDIT3P35638 169 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 MAGEA9P43362 315 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 PRPF4BQ13523 1007 aaKnown RBP9.52□□□□□ -0.89
COPB1-210ENST00000533533 UBXN2BQ14CS0 331 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 MAPK6Q16659 721 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 PABPC1LQ4VXU2 614 aaKnown RBP9.52□□□□□ -0.89
COPB1-210ENST00000533533 RSPO2Q6UXX9 243 aaPredicted RBP9.52□□□□□ -0.89
COPB1-210ENST00000533533 SV2BQ7L1I2 683 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 RTL10Q7L3V2 364 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 DYMQ7RTS9 669 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 LRRC15Q8TF66 581 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 DHX58Q96C10 678 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 KXD1Q9BQD3 176 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 ADPGKQ9BRR6 497 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 TIPINQ9BVW5 301 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 LTB4R2Q9NPC1 389 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 BLOC1S4Q9NUP1 217 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 HCFC1R1Q9NWW0 138 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 DLL3Q9NYJ7 618 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 DNMT3BQ9UBC3 853 aaKnown RBP9.52□□□□□ -0.89
COPB1-210ENST00000533533 MTRRQ9UBK8 725 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 FBXO4Q9UKT5 387 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 PCDHA7Q9UN72 937 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 USP20Q9Y2K6 914 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 SPAG17Q6Q759 2223 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.89
COPB1-210ENST00000533533 TMEM189-UBE2V1I3L0A0 370 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 K7ERI5 159 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 SPTLC1O15269 473 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 SLC16A4O15374 487 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 B3GAT3O94766 335 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 CD72P21854 359 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 GUCY2CP25092 1073 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 NPTX2P47972 431 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 SMTNP53814 917 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 CSTF1Q05048 431 aaKnown RBP9.51□□□□□ -0.89
COPB1-210ENST00000533533 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
COPB1-210ENST00000533533 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 EEF1DP3Q658K8 133 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 SHC4Q6S5L8 630 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 DAW1Q8N136 415 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 MYCT1Q8N699 235 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 LEO1Q8WVC0 666 aaPredicted RBP9.51□□□□□ -0.89
COPB1-210ENST00000533533 ATRIPQ8WXE1 791 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 ING5Q8WYH8 240 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 CLDN23Q96B33 292 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 REEP2Q9BRK0 252 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 GDE1Q9NZC3 331 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 KCND2Q9NZV8 630 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 RCOR1Q9UKL0 485 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 GDAQ9Y2T3 454 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 MRPS23Q9Y3D9 190 aaKnown RBP9.51□□□□□ -0.89
COPB1-210ENST00000533533 PCDHGA2Q9Y5H1 932 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 BACE2Q9Y5Z0 518 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 CDY1Q9Y6F8 540 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 MORC2Q9Y6X9 1032 aaPredicted RBP9.51□□□□□ -0.89
COPB1-210ENST00000533533 CHD6Q8TD26 2715 aa9.51□□□□□ -0.89
COPB1-210ENST00000533533 MYH11P35749 1972 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 A0A087X0B3 334 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 POLR2DO15514 142 aaKnown RBP9.5□□□□□ -0.89
COPB1-210ENST00000533533 TRAPPC3O43617 180 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 ECI2O75521 394 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 EDN1P05305 212 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 RHOP08100 348 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 PLS3P13797 630 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 IDEP14735 1019 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 IGFBP6P24592 240 aaPredicted RBP9.5□□□□□ -0.89
COPB1-210ENST00000533533 TKTP29401 623 aaKnown RBP9.5□□□□□ -0.89
COPB1-210ENST00000533533 MATR3P43243 847 aaKnown RBP eCLIP9.5□□□□□ -0.89
COPB1-210ENST00000533533 CLCNKBP51801 687 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 EFNA5P52803 228 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 STRN3Q13033 797 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 MAPK7Q13164 816 aa9.5□□□□□ -0.89
COPB1-210ENST00000533533 UPP1Q16831 310 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms