RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 HARSP12081 509 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 MUTP22033 750 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 PRPHP41219 470 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 GRM5P41594 1212 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 PTGDRQ13258 359 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 GRM2Q14416 872 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 NBR1Q14596 966 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 ECM1Q16610 540 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 PLA2G2FQ9BZM2 168 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 HEBP1Q9NRV9 189 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 DDX19AQ9NUU7 478 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 SMG5Q9UPR3 1016 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 TNFSF13BQ9Y275 285 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 PCDHB6Q9Y5E3 794 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 FAM208BQ5VWN6 2430 aa17.21■□□□□ 0.35
CHMP4A-207ENST00000533523 SPAG17Q6Q759 2223 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 SHISA7A6NL88 538 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 F13A1P00488 732 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 PEX3P56589 373 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 DMP1Q13316 513 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 PDIA5Q14554 519 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 TANGO2Q6ICL3 276 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 SLC8B1Q6J4K2 584 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 ZNF852Q6ZMS4 543 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 C4orf32Q8N8J7 132 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 TCEAL4Q96EI5 215 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 MRPL4Q9BYD3 311 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 CYP4F11Q9HBI6 524 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 SLC38A7Q9NVC3 462 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 NDRG2Q9UN36 371 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 KIAA1024Q9UPX6 916 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 MRPS17Q9Y2R5 130 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 NUB1Q9Y5A7 615 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 INSL5Q9Y5Q6 135 aa17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 ANKRD11Q6UB99 2663 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-207ENST00000533523 SDK1Q7Z5N4 2213 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 DCDC2BA2VCK2 349 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 NCAM2O15394 837 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 PTPN2P17706 415 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 FCARP24071 287 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 RESTQ13127 1097 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 TSSK4Q6SA08 328 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 PDZD4Q76G19 769 aaPredicted RBP17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 ELMOD1Q8N336 334 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 ZNF461Q8TAF7 563 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 DNASE1L2Q92874 299 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 SECISBP2LQ93073 1101 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 ELSPBP1Q96BH3 223 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 ACO2Q99798 780 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 BRD9Q9H8M2 597 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 AVENQ9NQS1 362 aaPredicted RBP17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 ZSCAN32Q9NX65 697 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 TCHHQ07283 1943 aa17.19■□□□□ 0.34
CHMP4A-207ENST00000533523 NUP210Q8TEM1 1887 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 KIF26AQ9ULI4 1882 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 H7C4K7 107 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 SYN3O14994 580 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 HIP1RO75146 1068 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 RPS9P46781 194 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 NPTX2P47972 431 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 CTXN3Q4LDR2 81 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 PRSS36Q5K4E3 855 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 POTEHQ6S545 545 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 IGSF22Q8N9C0 903 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 C18orf25Q96B23 403 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 CLDN23Q96B33 292 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 ZMAT2Q96NC0 199 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 TCHPQ9BT92 498 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 ZFP14Q9HCL3 533 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 KMT5AQ9NQR1 393 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 PRMT8Q9NR22 394 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 FBXL5Q9UKA1 691 aa17.18■□□□□ 0.34
CHMP4A-207ENST00000533523 TSC2P49815 1807 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ZNF197O14709 1029 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ABLIM3O94929 683 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 SEC24AO95486 1093 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 BMP15O95972 392 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 MCF2P10911 925 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 IGF2RP11717 2491 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ATF2P15336 505 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 MCM4P33991 863 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 CCR2P41597 374 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ATP2C1P98194 919 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ADCY1Q08828 1119 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 MTAPQ13126 283 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 FAM78AQ5JUQ0 283 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ZNF280DQ6N043 979 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 MPZL3Q6UWV2 235 aa17.17■□□□□ 0.34
CHMP4A-207ENST00000533523 ALKAL1Q6UXT8 129 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms