RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.421e-12■■■■□ 20.3
CTSB-228ENST00000533455 RASA4O43374 803 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 FDX1P10109 184 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 PTGER2P43116 358 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 MAGEA4P43358 317 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 NPTX2P47972 431 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 PSMC5P62195 406 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 TMED2Q15363 201 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 PARP6Q2NL67 630 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 C15orf39Q6ZRI6 1047 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 SEPT14Q6ZU15 432 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 NLGN1Q8N2Q7 840 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 SPIRE2Q8WWL2 714 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 C9orf72Q96LT7 481 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 ZNF570Q96NI8 536 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 OSBPL8Q9BZF1 889 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 TRIM33Q9UPN9 1127 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 NFASCO94856 1347 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 DENND3A2RUS2 1198 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 DIAPH2O60879 1101 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 POLGP54098 1239 aaPredicted RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 YARSP54577 528 aaKnown RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 BPIFB4P59827 614 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 DMP1Q13316 513 aaPredicted RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 TBC1D10BQ4KMP7 808 aaPredicted RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 ERICH1Q86X53 443 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 EXD1Q8NHP7 514 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 DENND1AQ8TEH3 1009 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 ANKRD27Q96NW4 1050 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 SH2D3AQ9BRG2 576 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 HEMGNQ9BXL5 484 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 LRMDAQ9H2I8 198 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 C1orf112Q9NSG2 853 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 STK38LQ9Y2H1 464 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 CALCAP01258 141 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 GCAP28676 217 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 NSFP46459 744 aaKnown RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 JAK3P52333 1124 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 TAS2R40P59535 323 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 MTMR1Q13613 665 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 XKR9Q5GH70 373 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 GPD1LQ8N335 351 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
CTSB-228ENST00000533455 CPA5Q8WXQ8 436 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 AGBL1Q96MI9 1066 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 TTC25Q96NG3 672 aa17.64■□□□□ 0.41
CTSB-228ENST00000533455 RBM15Q96T37 977 aaKnown RBP eCLIP17.64■□□□□ 0.419e-7■■■■□ 22.2
CTSB-228ENST00000533455 PSEN1P49768 467 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 CCDC142Q17RM4 750 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 LIN9Q5TKA1 542 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 TRIM72Q6ZMU5 477 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 ANKS1BQ7Z6G8 1248 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 UTP4Q969X6 686 aaKnown RBP17.63■□□□□ 0.41
CTSB-228ENST00000533455 NTPCRQ9BSD7 190 aaKnown RBP17.63■□□□□ 0.41
CTSB-228ENST00000533455 PI4K2AQ9BTU6 479 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 KIFC3Q9BVG8 833 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 MYLK2Q9H1R3 596 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 KMT5AQ9NQR1 393 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 USH1CQ9Y6N9 552 aa17.63■□□□□ 0.41
CTSB-228ENST00000533455 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 NFIBO00712 420 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 DNALI1O14645 258 aaPredicted RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 ATP2A2P16615 1042 aaKnown RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 GARTP22102 1010 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 CAP2P40123 477 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 MOGSQ13724 837 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 SPARCL1Q14515 664 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 SETDB1Q15047 1291 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 P3H1Q32P28 736 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 PLA2G4FQ68DD2 849 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 MIS18BP1Q6P0N0 1132 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 LLGL2Q6P1M3 1020 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 DRICH1Q6PGQ1 229 aaPredicted RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 BZW1Q7L1Q6 419 aaKnown RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 MCF2L2Q86YR7 1114 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 AGGF1Q8N302 714 aaeCLIP17.62■□□□□ 0.41
CTSB-228ENST00000533455 FAM151AQ8WW52 585 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 POMGNT1Q8WZA1 660 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 ELMO3Q96BJ8 720 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 FAXDC2Q96IV6 333 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 VCPIP1Q96JH7 1222 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 C17orf75Q9HAS0 396 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 ETNK1Q9HBU6 452 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 SENP1Q9P0U3 644 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 EXOC1LA0A1B0GW35 172 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 SFNP31947 248 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 SPDYAQ5MJ70 313 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 FAM47EQ6ZV65 393 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 PRUNE1Q86TP1 453 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 SAMD3Q8N6K7 520 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms